YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Socs44A-PA
Organism: Drosophila melanogaster
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Socs44A-PA.

Description E-value Query
Range
Subject
Range
gi|223627 - gi|223627|prf||0903255A protein v-src
240.0 [0..30] [336..248]

Back

Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHGDQSQNQ SSQRSQALTG GGDSPRDREK EKKGWFHSLT RRKKSDSALA VTASAAVSTS  60
   61 GSQNNNNEVC VLEAADSSMA SCSNGGTGTG TLRRRRDKDK RNVFARLRRK VGQGLSSLRN 120
  121 WHSMGDCDDG GTTDATYEFL TPAICPEPTL PFTHDYLRFI RKKWLEREDA HSPNQIMYKA 180
  181 CSEMLNQVWY WGEISRRDSQ RQLSDKPTGS FLVRDSETSG SQFTLSFRIV NVTLHYRLEY 240
  241 RDNFWHFEEL KYESIVEMIE DILHRCTNDN FVCFVKVPNE MQPPFPVILK YPLSRYSNMP 300
  301 KLQDLCRRVL QRQMSREQLA QLPVPAQMLE YLSVERELVF QS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.0
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
protein binding 3.19631993182765 bayes_pls_golite062009
binding 2.48735671726158 bayes_pls_golite062009
insulin receptor binding 2.1238568876176 bayes_pls_golite062009
molecular adaptor activity 1.33740973673697 bayes_pls_golite062009
SH3/SH2 adaptor activity 1.2323381312171 bayes_pls_golite062009
growth hormone receptor binding 1.17624762106986 bayes_pls_golite062009
signal transducer activity 0.999269271132931 bayes_pls_golite062009
molecular transducer activity 0.999269271132931 bayes_pls_golite062009
insulin-like growth factor receptor binding 0.950445630788802 bayes_pls_golite062009
protein binding, bridging 0.83823250804321 bayes_pls_golite062009
receptor binding 0.460399756639525 bayes_pls_golite062009
cytoskeletal protein binding 0.116213194167522 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle