| Protein: | drosha-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1327 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for drosha-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1105.0 | [0..19] | [1242..26] |
|
Region A: Residues: [1-441] |
1 11 21 31 41 51
| | | | | |
1 MYQPPLPPPP VQPAPPPPPP PPEEDLSPPG VGVPSHNYSS NESHSQSSKS LDYVYPETPA 60
61 PYASSVPSYD PYQQPPAYGY EGYAYNEQAQ KYGGQESHYQ YQYPASGSSF LYESYKYPDR 120
121 YPAYSSNYRP PSERQRYTSN SSSQGYHHYP GYSSGRRYEQ RHDQEHRQIQ DSRYAHEPRH 180
181 GHYAHRQAKG SQHGYYGSAA RNQVSDDYSP RGHHERERNE TLEKTRAKPK VETERDRLLR 240
241 QWCSNFCEKP EDYVKKMNAL SEADAPVESW VRSSPAELYY ERTKSENEVR GRARLQKLCT 300
301 LFDEELLQRA KRVREKLPVY VPPPRKARRR VCKHKHKSEA CSSSSSSDDD SDEDAFKIEQ 360
361 DCCMEELSRK VQHPQRVHAD LWHNDAGEMN DGPLCRCSAK SRRIGIRHGI YPGETGYKLC 420
421 DPNSNNAGKL FHYRISISPP T
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
|
Region A: Residues: [442-800] |
1 11 21 31 41 51
| | | | | |
1 NFLTKTPTII KHDEHEFLFE GFSLLSHVRL SDLPVCKVIR FNIEYTIEYE EEKMPENFTI 60
61 HELDIFFKYL FHELLELVDF NLMPNLPSGN VEESCPAFHF FPRFVRDLPD NGKEVLAMVE 120
121 VLRYLLDNSA QLVERQQLLH LNQISQSEWQ NYVDFIKGML VTKPGYKPCS LRVDQLDRNN 180
181 SDLPECVDRE TGISHPAIVH FGICHPQLSY AGNPEYQKAW REYVKYRHLM ANMSKPSFKD 240
241 KRKLEEKEQR LQEMRTQGRM KRNITVAISS EGFYRTGIMC DVVQHAMLIP VLTGHLRFHK 300
301 SLDLLEESIG YRFKNRYLLQ LALTHPSYKE NYGTNPDHAR NSLTNCGIRQ PEYGDRKIH
|
| Detection Method: | |
| Confidence: | 1.38 |
| Match: | 2fflA |
| Description: | Crystal Structure of Dicer from Giardia intestinalis |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [801-968] |
1 11 21 31 41 51
| | | | | |
1 YMNTRKRGIN TLVSIMSRFG KEHETVSNIT HNERLEFLGD AVVEFLSSIH LFFMFPELEE 60
61 GGLATYRAAI VQNQHLALLA KKLQLEEFML YAHGSDLCHE LELRHAMANC FEALMGALLL 120
121 DGGIKVADEV FTDALFRQDE KLLSIWKNLP EHPLQEQEPL GDRSCIDS
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1i4sA |
| Description: | RNase III endonuclease catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [969-1200] |
1 11 21 31 41 51
| | | | | |
1 YRVLKELTKF EDSIGIKFKH IRLLARAFTD RSIGFTHLTL GSNQRLEFLG DTVLQLICSE 60
61 YLYRHFPEHH EGHLSLLRSS LVNNRTQAVV CDDLGMPKYA VYANPKADLK TKDRADLLEA 120
121 FLGALYVDKG LLYCEQFCHV CLFPRLQLFI MNQDWNDPKS KLQQCCLTLR TMDGGEPDIP 180
181 YYKVVEASGP TNTRVYKVAV YFRSKRLATS SGSSIQQAEM NAAKQALENS RD
|
| Detection Method: | |
| Confidence: | 64.30103 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1201-1327] |
1 11 21 31 41 51
| | | | | |
1 LFPQLDHQKR VIAKSIKKQT GNELDNDSDR QHQEEKIKRP KYATPLQDES HLPKQYRMHE 60
61 NISSDELPED EDFESTAPKS PTMPLRSNRS GSSSSSSSSD SDGSTSSPKC KRRLKKCSSV 120
121 SSKSSLG
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1qu6A |
| Description: | dsRNA-dependent protein kinase pkr |
Matching Structure (courtesy of the PDB): |
|
