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View Structure Prediction Details

Protein: sax-PA
Organism: Drosophila melanogaster
Length: 570 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sax-PA.

Description E-value Query
Range
Subject
Range
gi|468028 - gi|468028|gb|AAA18208.1| serine-threonine kinase receptor
442.0 [0..1] [570..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESNIYLVFL LTFLLYNNAR AEISDHLRED IPDLDMELSS ASSAHLNGKE LPAVPQNSVQ  60
   61 THPRYKCYSC EPPCRDPYEF THTCQNAIQC WKSRTRDADG QVQESRGCST SPDQLPMICS 120
  121 QNSLKINGPS KRNTGKFVNV VCCAGDYCNE GDFPELLPFD SNDVTVITAD TSSISKMLVA 180
  181 VLGPFLVIAL LGAVTIFFIR RS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 1rewC
Description: Structural refinement of the complex of bone morphogenetic protein 2 and its type IA receptor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pattern binding 0.21003196804615 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [203-570]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HRKRLAASRT KQDPEAYLVN DELLRATSAG DSTLREYLQH SVTSGSGSGL PLLVQRTLAK  60
   61 QVTLIECIGR GKYGEVWRGH WHGESIAVKI FFSRDEESWK RETEIYSTIL LRHENILGFI 120
  121 GSDMTSRNSC TQLWLMTHYY PLGSLFDHLN RNALSHNDMV WICLSIANGL VHLHTEIFGK 180
  181 QGKPAMAHRD LKSKNILVTS NGSCVIADFG LAVTHSHVTG QLDLGNNPKV GTKRYMAPEV 240
  241 LDESIDLECF EALRRTDIYA FGLVLWEVCR RTISCGIAEE YKVPFYDVVP MDPSFEDMRK 300
  301 VVCIDNYRPS IPNRWSSDSL MTGMSKLMKE CWHQNPDVRL PALRIKKTIH KLASADEKIR 360
  361 LDFDEVCV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.154902
Match: 1b6cB
Description: Type I TGF-beta receptor R4
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle