Protein: | so-PA |
Organism: | Drosophila melanogaster |
Length: | 416 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for so-PA.
Description | E-value | Query Range |
Subject Range |
|
237.0 | [0..1] | [306..1] |
Region A: Residues: [1-93] |
1 11 21 31 41 51 | | | | | | 1 MLQHPATDFY DLAAANAAAV LTARHTPPYS PTGLSGSVAL HNNNNNNSST SNNNNSTLDI 60 61 MAHNGGGAGG GLHLNSSSNG GGGGGVVSGG GSG |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [94-282] |
1 11 21 31 41 51 | | | | | | 1 GRENLPSFGF TQEQVACVCE VLQQAGNIER LGRFLWSLPQ CDKLQLNESV LKAKAVVAFH 60 61 RGQYKELYRL LEHHHFSAQN HAKLQALWLK AHYVEAEKLR GRPLGAVGKY RVRRKFPLPR 120 121 TIWDGEETSY CFKEKSRSVL RDWYSHNPYP SPREKRDLAE ATGLTTTQVS NWFKNRRQRD 180 181 RAAEHKDGS |
Detection Method: | |
Confidence: | 27.69897 |
Match: | 1cqtA |
Description: | Oct-1 POU Homeodomain; Oct-1 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [283-416] |
1 11 21 31 41 51 | | | | | | 1 TDKQHLDSSS DSEMEGSMLP SQSAQHQQQQ QQQQHSPGNS SGNNNGLHQQ QLQHVAAEQG 60 61 LQHHPHQPHP ASNIANVAAT KSSGGGGGGG VSAAAAAQMQ MPPLTAAVAY SHLHSVMGAM 120 121 PMTAMYDMGE YQHL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.