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View Structure Prediction Details

Protein: BubR1-PA
Organism: Drosophila melanogaster
Length: 1460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BubR1-PA.

Description E-value Query
Range
Subject
Range
gi|28317135 - gi|28317135|gb|AAD27864.2|AF132565_1 LD23835p [Drosophila melanogaster]
854.0 [0..1] [1460..25]

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Predicted Domain #1
Region A:
Residues: [1-294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFDNAKENI QPLASGRNVS LLQASLSQDS THGQELLAQR KQMEEEVRTY KGADPLGAWY  60
   61 TFICWIEQSY PAGGSGSGLQ TVLHQCLTKF EDDERYRQDK RLIKLFIKFM EKQKDKIEFY 120
  121 QQMYNNGIGT MLADFYIAWA YSYDLSGNMR KADEIFRLGL ECRAEPLEDL KEAHHHFGYT 180
  181 VGQRMLYSTG EEANAVNQEL NERRLALQSL HGRRQQISNS ITVGSIRTGA AVKSGLPGVV 240
  241 QVEPSTTTSR RNVGRNVEVF NDENSEGNIP ISNSETEVKS SLRSIIDSAC SQEN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.06
Match: 2uy1A
Description: No description for 2uy1A was found.

Predicted Domain #2
Region A:
Residues: [295-360]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IKEPVAWNKA NAKRHKHGKI FGSNASPDLG FDIHVDEQAM PPITNYERRL EQPFRFPTNF  60
   61 VAKNRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [361-603]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QEPWVTPVTI EDEPNASGLP CYNKCLLYPR PNIEFSPEEY RAYSFLKHRN PQHPFIHRND  60
   61 DWWGTGRVIR GIRCYPNFAR YSKPQDLDEL DKFWKPPLVP GLQVVFDKIY NEVEQKEYQP 120
  121 EELLAAKWME KRNVTVHGDF DMEETVCLPG NKMPRRKSFF PSSFRKSIMP RRVSSVQEED 180
  181 EKKEDEATLI VKDIPSQVAP KIPESPCDQI DEPKIKIFED SGSPRDNFAV PAVPVPKIEI 240
  241 YED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [604-694]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEEPQPTPKT RPFYDGDETC STQMFNMFIK SQAVSTPKGT QKQAPSRQFG TVLKELPLPE  60
   61 EAAHSVESPV ETRSPTLRKQ LSTILETSEH G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [695-894]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQSLATSGTT TKSTITSTSS PGSNAVSKLG SKIEENTPGQ MRLQRVISAG VSAVLSEPEK  60
   61 PGGDNFLRRE LWEPNAPSVP MLKSLRFQED KTETIPRPLA CFQEDKTETL PQMPIALPEN 120
  121 SMDHGSLGAE NCFSAPQLPT LEDESDLCGL FGKTPPKTNI FGSPKRNFDP TSQLFKSTQG 180
  181 DRRSFAVTGN KLEAAPSISN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [895-1156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQDSFMCDLS FVPETQPEAV AKSGAIQKFD IFLDDTQPKL TKSKPVALMV SSFDLDCTLP  60
   61 ETQQVAIKEP GTQQENIGHS HMIASFMKDC TEIGSCPSQM PASVVKTNIS STSNKIKFSN 120
  121 DSMSESSRKA PVNENVGISK QPDEFFELNA ATEMFATNIS MIKNSTLLIP NAKVAEASEL 180
  181 SIYYKTTPLT PKQSHRSWSQ SDLETPPREN FVHPTSNGDQ TVLNETLADA NKNPFNVELI 240
  241 SSLLESIDFS MYIEKLPHCQ LV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1157-1460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHVKRLHPNT HLEVHNEKFE VSKMIGKGAY GSVYVGKHLK SGKKVALKQE RPTNYWEFYI  60
   61 CLEIHSRLTS EQMIPSYAHI DYALVGNNSS VYISEFSDYG SLIGVCNKVK SVTNRNMDEY 120
  121 VVMHLSCQML DIVDHLHAMG IIHADIKPDN FLLMKPICAD PNEVSLQLID FGVSIDMKLF 180
  181 PDNQTFNYVH HDDLFKCIEM RTGRPWTYQL DLYGLVSVMH VLLFGRYMEV VQRSPSTIWM 240
  241 PKTNVPRYFQ RTMWENIFRT LLNIRDCRTM PNLQQLRTQL KCALAEKEKY VAEAISKFNT 300
  301 ILQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.39794
Match: 2jdoA
Description: No description for 2jdoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle