Protein: | ap-PA |
Organism: | Drosophila melanogaster |
Length: | 469 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ap-PA.
Description | E-value | Query Range |
Subject Range |
|
302.0 | [0..40] | [455..2477] |
Region A: Residues: [1-82] |
1 11 21 31 41 51 | | | | | | 1 MGVCTEERPV MHWQQSARFL GPGAREKSPT PPVAHQGSNQ CGSAAGANNN HPLFRACSSS 60 61 SCPDICDHST KPFGNAYGTE SF |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [83-185] |
1 11 21 31 41 51 | | | | | | 1 RSYETADRAT FEDSAAKFSI SRSRTDCTEV SDETTSGISF KTEPFGPPSS PESTSDSKIT 60 61 RNLDDCSGCG RQIQDRFYLS AVEKRWHASC LQCYACRQPL ERE |
Detection Method: | |
Confidence: | 0.967 |
Match: | 1cxxA |
Description: | Cysteine-rich (intestinal) protein, CRP, CRIP |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [186-266] |
1 11 21 31 41 51 | | | | | | 1 SSCYSRDGNI YCKNDYYSFF GTRRCSRCLA SISSNELVMR ARNLVFHVNC FCCTVCHTPL 60 61 TKGDQYGIID ALIYCRTHYS I |
Detection Method: | |
Confidence: | 16.221849 |
Match: | 2dfyX |
Description: | No description for 2dfyX was found. |
Region A: Residues: [267-361] |
1 11 21 31 41 51 | | | | | | 1 AREGDTASSS MSATYPYSAQ FGSPHNDSSS PHSDPSRSIV PTGIFVPASH VINGLPQPAR 60 61 QKGRPRKRKP KDIEAFTANI DLNTEYVDFG RGSHL |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [362-469] |
1 11 21 31 41 51 | | | | | | 1 SSSSRTKRMR TSFKHHQLRT MKSYFAINHN PDAKDLKQLS QKTGLPKRVL QVWFQNARAK 60 61 WRRMMMKQDG SGLLEKGEGA LDLDSISVHS PTSFILGGPN STPPLNLD |
Detection Method: | |
Confidence: | 7.0 |
Match: | 2dmqA |
Description: | No description for 2dmqA was found. |