| Protein: | giac-PA |
| Organism: | Drosophila melanogaster |
| Length: | 273 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for giac-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
253.0 | [0..27] | [271..545] |
|
|
252.0 | [0..5] | [271..847] |
|
|
252.0 | [0..4] | [271..551] |
|
|
252.0 | [0..5] | [271..644] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MAHNSRNNLG IMRLREDVDD ISHILRQQQI DSKVAQGSCK FNCLGGEPKG VGSGMCNNRD 60
61 VSAYVDTLFK RKIGHLMDDV YNLKKQVMSA DCSSKSAQST PKPESV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.454 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.357 | b.34.8 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain |
| View | Download | 0.347 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.324 | a.118.1 | ARM repeat |
| View | Download | 0.292 | a.133.1 | Phospholipase A2, PLA2 |
|
Region A: Residues: [107-273] |
1 11 21 31 41 51
| | | | | |
1 ALAKPRINYA SEELGARIIN VKAHSIDGTN IIRSLLGLDF STNPPVNMIR TGLSPGSCFG 60
61 FNGSRATVTL HLARTIIVEA ITLTHVAREM TPDLCVKSAP KNFDGLRSEN SKRELLGQWS 120
121 YDNAANKRTQ SYSVRSDTFF RNLDFSFNSN HGANSTCIYR VEVYGRL
|
| Detection Method: | |
| Confidence: | 2.24 |
| Match: | 1tvgA |
| Description: | X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.849929350901 | bayes_pls_golite062009 |
| protein binding | 0.843446597674347 | bayes_pls_golite062009 |
| integrin binding | 0.389417870075603 | bayes_pls_golite062009 |
