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View Structure Prediction Details

Protein: CG8885-PA
Organism: Drosophila melanogaster
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8885-PA.

Description E-value Query
Range
Subject
Range
PRDX_ASCSU - Peroxiredoxin OS=Ascaris suum PE=2 SV=1
174.0 [0..77] [248..6]
gi|34542000 - gi|34542000|gb|AAQ74891.1| thioredoxin peroxidase [Trichomonas vaginalis]
gi|123974738, gi... - gi|123974738|ref|XP_001330099.1| thioredoxin peroxidase [Trichomonas vaginalis G3], gi|121895915|gb|...
173.0 [0..75] [248..1]
PRDX2_CRIGR - Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=2 SV=3
173.0 [0..77] [248..8]
gi|62901916 - gi|62901916|gb|AAY18909.1| thioredoxin peroxidase 1-like [synthetic construct]
173.0 [0..75] [248..30]
gi|632720 - gi|632720|gb|AAB32034.1| TSA=thiol-specific antioxidant [rats, brain, Peptide, 198 aa]
PRDX2_RAT - Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1 SV=3
173.0 [0..77] [248..8]
gi|33634943, gi|... - gi|33863026|ref|NP_894586.1| thioredoxin peroxidase [Prochlorococcus marinus str. MIT 9313], gi|3363...
172.0 [0..70] [247..2]
gi|51980440 - gb|AAH82149.1| Unknown (protein for MGC:98395) [Xenopus laevis]
PRDX2_MOUSE - Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3
172.0 [0..75] [248..6]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSLQRLVG SCRRWAQQPA IRHYAAPADS TKGKGPISWR SLAVIGALGA GGVGFMLYVK  60
   61 SEKDEARMKE RQR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLGKAAIGGS WELVDSQGAV RKSEDFLGKW LLIYFGFTHC PDICPDELEK MAAVVDEVEK  60
   61 SPQTPAVQPI FITVDPERDS KEVVAKYVKE FSPKLLGLTG TVEQIRKVCK AFRVYFSAGP 120
  121 RDEDNDYIVD HTIIMYLVNP DGEFVDYYGQ NRDKDQCVAS ILVNIAKWNS MNKKGWFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.30103
Match: 2gqkA
Description: No description for 2gqkA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle