YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG8885-PA
Organism: Drosophila melanogaster
Length: 251 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG8885-PA.

Description E-value Query
Range
Subject
Range
PRDX_ASCSU - Peroxiredoxin OS=Ascaris suum PE=2 SV=1
174.0 [0..77] [248..6]
gi|34542000 - gi|34542000|gb|AAQ74891.1| thioredoxin peroxidase [Trichomonas vaginalis]
gi|123974738, gi... - gi|123974738|ref|XP_001330099.1| thioredoxin peroxidase [Trichomonas vaginalis G3], gi|121895915|gb|...
173.0 [0..75] [248..1]
PRDX2_CRIGR - Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=2 SV=3
173.0 [0..77] [248..8]
gi|62901916 - gi|62901916|gb|AAY18909.1| thioredoxin peroxidase 1-like [synthetic construct]
173.0 [0..75] [248..30]
gi|632720 - gi|632720|gb|AAB32034.1| TSA=thiol-specific antioxidant [rats, brain, Peptide, 198 aa]
PRDX2_RAT - Peroxiredoxin-2 OS=Rattus norvegicus GN=Prdx2 PE=1 SV=3
173.0 [0..77] [248..8]
gi|33634943, gi|... - gi|33863026|ref|NP_894586.1| thioredoxin peroxidase [Prochlorococcus marinus str. MIT 9313], gi|3363...
172.0 [0..70] [247..2]
gi|51980440 - gb|AAH82149.1| Unknown (protein for MGC:98395) [Xenopus laevis]
PRDX2_MOUSE - Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3
172.0 [0..75] [248..6]

Back

Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSLQRLVG SCRRWAQQPA IRHYAAPADS TKGKGPISWR SLAVIGALGA GGVGFMLYVK  60
   61 SEKDEARMKE RQR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-251]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLGKAAIGGS WELVDSQGAV RKSEDFLGKW LLIYFGFTHC PDICPDELEK MAAVVDEVEK  60
   61 SPQTPAVQPI FITVDPERDS KEVVAKYVKE FSPKLLGLTG TVEQIRKVCK AFRVYFSAGP 120
  121 RDEDNDYIVD HTIIMYLVNP DGEFVDYYGQ NRDKDQCVAS ILVNIAKWNS MNKKGWFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.30103
Match: 2gqkA
Description: No description for 2gqkA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle