| Protein: | BOK_RAT |
| Organism: | Rattus norvegicus |
| Length: | 213 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOK_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
254.0 | [0..1] | [213..1] |
|
|
251.0 | [0..1] | [213..1] |
|
|
243.0 | [0..1] | [213..1] |
|
|
241.0 | [0..1] | [213..1] |
|
|
218.0 | [0..1] | [213..1] |
|
|
208.0 | [0..1] | [213..1] |
|
Region A: Residues: [1-213] |
1 11 21 31 41 51
| | | | | |
1 MEVLRRSSVF AAEIMDAFDR SPTDKELVAQ AKALGREYVH ARLLRAGLSW SAPERASPAP 60
61 GGRLAEVCTV LLRLGDELEQ IRPSVYRNVA RQLHIPLQSE PVVTDAFLAV AGHIFSAGIT 120
121 WGKVVSLYSV AAGLAVDCVR QAQPAMVHAL VDCLGEFVRK TLATWLRRRG GWTDVLKCVV 180
181 STDPGFRSHW LVATLCSFGR FLKAAFFLLL PER
|
| Detection Method: |  |
| Confidence: | 45.69897 |
| Match: | 1yswA |
| Description: | Solution structure of the anti-apoptotic protein Bcl-2 complexed with an acyl-sulfonamide-based ligand |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.78803636113333 | bayes_pls_golite062009 |
| binding | 2.12358089265543 | bayes_pls_golite062009 |
| protein dimerization activity | 1.64504453561047 | bayes_pls_golite062009 |
| protein heterodimerization activity | 1.52306670675388 | bayes_pls_golite062009 |
| death domain binding | 0.807539351618739 | bayes_pls_golite062009 |
| identical protein binding | 0.488482699265135 | bayes_pls_golite062009 |
| BH3 domain binding | 0.351738412090861 | bayes_pls_golite062009 |
| BH domain binding | 0.173539163685055 | bayes_pls_golite062009 |
| caspase regulator activity | 0.0685275773265202 | bayes_pls_golite062009 |
