| Protein: | NOGG_RAT |
| Organism: | Rattus norvegicus |
| Length: | 144 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOGG_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
253.0 | [0..11] | [144..99] |
|
|
253.0 | [0..11] | [144..99] |
|
|
253.0 | [0..11] | [144..99] |
|
|
253.0 | [0..11] | [144..99] |
|
|
249.0 | [0..11] | [144..343] |
|
|
248.0 | [0..11] | [144..328] |
|
|
241.0 | [0..11] | [139..99] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 GGGGGPAGGA EDLAELDQLL RQRPSGAMPS EIKGLEFSEG LAQGKKQRLS KKLRRKLQMW 60
61 LWSQTFCPVL YAWNDLGSRF WARYVKVGSC FSKRSCSVPE GMVCKPSKSV HLTVLRWRCQ 120
121 RRGGQRCGWI PIQYPIISEC KCSC
|
| Detection Method: |  |
| Confidence: | 67.0 |
| Match: | 1m4uA |
| Description: | Noggin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor serine/threonine kinase binding | 4.8369569327215 | bayes_pls_golite062009 |
| growth factor activity | 4.74498867224238 | bayes_pls_golite062009 |
| receptor binding | 4.70889547404918 | bayes_pls_golite062009 |
| transmembrane receptor protein serine/threonine kinase binding | 4.69128752159226 | bayes_pls_golite062009 |
| transforming growth factor beta receptor binding | 4.69128752159226 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 1 binding | 3.6158922900246 | bayes_pls_golite062009 |
| cytokine activity | 3.61376517935324 | bayes_pls_golite062009 |
| protein binding | 3.16282476674164 | bayes_pls_golite062009 |
| type II transforming growth factor beta receptor binding | 3.06631842262117 | bayes_pls_golite062009 |
| cell surface binding | 2.9725198156666 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 2 binding | 2.88765567751765 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor binding | 2.76400237542695 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 2.49731836866959 | bayes_pls_golite062009 |
| growth factor binding | 2.41942870726502 | bayes_pls_golite062009 |
| binding | 2.37954321554411 | bayes_pls_golite062009 |
| heparin binding | 2.11784489374422 | bayes_pls_golite062009 |
| platelet-derived growth factor binding | 2.01091405432331 | bayes_pls_golite062009 |
| hormone activity | 1.83166472515554 | bayes_pls_golite062009 |
| platelet-derived growth factor receptor binding | 1.78479767888975 | bayes_pls_golite062009 |
| collagen binding | 1.64555624988816 | bayes_pls_golite062009 |
| glial cell line-derived neurotrophic factor receptor binding | 1.5411449057785 | bayes_pls_golite062009 |
| protein dimerization activity | 1.44846386076063 | bayes_pls_golite062009 |
| polysaccharide binding | 1.16191864095271 | bayes_pls_golite062009 |
| protein homodimerization activity | 1.13743310822539 | bayes_pls_golite062009 |
| identical protein binding | 1.0030262164995 | bayes_pls_golite062009 |
| morphogen activity | 0.91146826241391 | bayes_pls_golite062009 |
| pattern binding | 0.90497366619649 | bayes_pls_golite062009 |
| neurotrophin receptor binding | 0.81172494974121 | bayes_pls_golite062009 |
| vascular endothelial growth factor receptor 3 binding | 0.583797120004309 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.408562885230686 | bayes_pls_golite062009 |
| signal transducer activity | 0.102347067903142 | bayes_pls_golite062009 |
| molecular transducer activity | 0.102347067903142 | bayes_pls_golite062009 |
| fibronectin binding | 0.0979012997097199 | bayes_pls_golite062009 |
| carbohydrate binding | 0.0235054088545197 | bayes_pls_golite062009 |
