| Protein: | FGF14_RAT |
| Organism: | Rattus norvegicus |
| Length: | 247 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FGF14_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..1] | [247..1] |
|
|
297.0 | [0..1] | [247..1] |
|
|
284.0 | [0..1] | [247..1] |
|
|
283.0 | [0..1] | [244..1] |
|
|
281.0 | [0..1] | [247..1] |
|
|
281.0 | [0..1] | [247..1] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MAAAIASGLI RQKRQAREQH WDRPSASRRR SSPSKNRGLC NGNLVDIFSK VRIFGLKKRR 60
61
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [61-247] |
1 11 21 31 41 51
| | | | | |
1 LRRQDPQLKG IVTRLYCRQG YYLQMHPDGA LDGTKDDSTN STLFNLIPVG LRVVAIQGVK 60
61 TGLYIAMNGE GYLYPSELFT PECKFKESVF ENYYVIYSSM LYRQQESGRA WFLGLNKEGQ 120
121 VMKGNRVKKT KPAAHFLPKP LEVAMYREPS LHDVGETVPK AGVTPSKSTS ASAIMNGGKP 180
181 VNKCKTT
|
| Detection Method: | |
| Confidence: | 49.221849 |
| Match: | 1q1uA |
| Description: | Crystal structure of human FHF1b (FGF12b) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor binding | 4.30358117760805 | bayes_pls_golite062009 |
| growth factor activity | 3.97089267530575 | bayes_pls_golite062009 |
| cytokine activity | 3.76931834545338 | bayes_pls_golite062009 |
| binding | 2.90110516688922 | bayes_pls_golite062009 |
| protein binding | 1.94397222237906 | bayes_pls_golite062009 |
| fibroblast growth factor receptor binding | 1.9437092554389 | bayes_pls_golite062009 |
| pattern binding | 0.839280621598109 | bayes_pls_golite062009 |
| interleukin-1 receptor binding | 0.8084616632765 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 0.69866345905635 | bayes_pls_golite062009 |
| heparin binding | 0.290941670257021 | bayes_pls_golite062009 |
