| Protein: | gi|125553780 |
| Organism: | Oryza sativa Indica Group |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125553780.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..1] | [212..1] |
|
Region A: Residues: [1-121] |
1 11 21 31 41 51
| | | | | |
1 MGRSPCCEQD ADVKKGPWTP EEDKLLVEYI GKNGHGSWRR LPKLAGLNRC GKSCRLRWTN 60
61 YLRPDIKRGG FSDDEERLII HLHATLGNKW SSIATKLKGR TDNEIKNYWN THLRKKLLSQ 120
121 G
|
| Detection Method: |  |
| Confidence: | 36.69897 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [122-217] |
1 11 21 31 41 51
| | | | | |
1 IDPVTHRPRT DLLAGLPNLL AAANLGGAAH QLPLDLNAIK LQADAAKFQI LQGLLRVLAS 60
61 TTAPPPTAAV LPGTDLMTSI LGATLAANSA GILGQQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [218-367] |
1 11 21 31 41 51
| | | | | |
1 QQLAGVDLSR LGQYNGNYDN LPPLTNDSCT QQTQPAMSSM SPDSLLNRIS SGISGDMLGS 60
61 PELCHGGDGL SSPELGQGGP SASNMTTSPM APPPPMVAAD DHQCNTNTPS GGGDGMSCEQ 120
121 TPASSTFDGL NLDDIDMEGC WAMTDILLAE
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
