| Protein: | gi|125543898 |
| Organism: | Oryza sativa Indica Group |
| Length: | 226 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125543898.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..1] | [226..1] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MASLSPSLHL PCNSRTGFAG KTQGIRLRVI PAGRVGFVRT TVECKESRIG KKPIEVPSNV 60
61 TLTLEEQFIK AKGPLGELSL NYPGEVKVVK EESGKLRVSK TVETKRANQM HGLFRTLTDN 120
121 IIVGVSKGFD KKLQLVGVGY RAAVEGKDLV MNLGFSHPVR MAVPEGLKVK VEENTRIIVS 180
181 GYDKSEIGQF AASIKKWRPP EPYKGKGIRY ADEIVRRKEG KAGKKK
|
| Detection Method: |  |
| Confidence: | 63.045757 |
| Match: | 1c04B |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.94614353072897 | bayes_pls_golite062009 |
| structural molecule activity | 9.3691467221987 | bayes_pls_golite062009 |
| binding | 1.60103058866857 | bayes_pls_golite062009 |
| protein binding | 0.574304313407193 | bayes_pls_golite062009 |
