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View Structure Prediction Details

Protein: gi|218194960, gi...
Organism: Oryza sativa Indica Group
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218194960, gi....

Description E-value Query
Range
Subject
Range
gi|30693281, gi|... - gi|30693281|ref|NP_564467.2| unknown protein [Arabidopsis thaliana], gi|27808598|gb|AAO24579.1| At1g...
552.0 [0..1] [386..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLLSKLRS LDAYPKVNED FYSRTLSGGI ITLASSVVML LLFVSELRLY LHAVTETTLR  60
   61 VDTSRGETLR INFDVTFPAL QCSIISLDAM DISGQEHLDV KH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIFKQRIDVH GNVIATKQDA VGGMKVEQPL QRHGGRLEHN ETYCGSCYGA EESDEQCCNS  60
   61 CEDVREAYRK KGWGVSNPDL IDQCKREGFL QSIKDEEGEG CNIYGFLEVN KVAGNFHFAP 120
  121 GKSFQKANVH VHDLLPFQK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSFNVSHKIN KLSFGQRFPG VVNPLDGAQW MQHSSYGMYQ YFIKVVPTVY TDINEHIILS  60
   61 NQFSVTEHFR SSESGRIQAV PGVFFFYDLS PIKVTFTEQH VSFLHFLTNV CAIVGGVFTV 120
  121 SGIIDSFVYH GQRAIKKKME IGKFN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle