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View Structure Prediction Details

Protein: gi|218194960, gi...
Organism: Oryza sativa Indica Group
Length: 386 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218194960, gi....

Description E-value Query
Range
Subject
Range
gi|30693281, gi|... - gi|30693281|ref|NP_564467.2| unknown protein [Arabidopsis thaliana], gi|27808598|gb|AAO24579.1| At1g...
552.0 [0..1] [386..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLLSKLRS LDAYPKVNED FYSRTLSGGI ITLASSVVML LLFVSELRLY LHAVTETTLR  60
   61 VDTSRGETLR INFDVTFPAL QCSIISLDAM DISGQEHLDV KH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIFKQRIDVH GNVIATKQDA VGGMKVEQPL QRHGGRLEHN ETYCGSCYGA EESDEQCCNS  60
   61 CEDVREAYRK KGWGVSNPDL IDQCKREGFL QSIKDEEGEG CNIYGFLEVN KVAGNFHFAP 120
  121 GKSFQKANVH VHDLLPFQK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [242-386]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSFNVSHKIN KLSFGQRFPG VVNPLDGAQW MQHSSYGMYQ YFIKVVPTVY TDINEHIILS  60
   61 NQFSVTEHFR SSESGRIQAV PGVFFFYDLS PIKVTFTEQH VSFLHFLTNV CAIVGGVFTV 120
  121 SGIIDSFVYH GQRAIKKKME IGKFN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle