| Protein: | gi|117646526, gi... |
| Organism: | synthetic construct |
| Length: | 632 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|117646526, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..632] | [1..632] |
|
|
0.0 | [1..632] | [1..632] |
|
|
0.0 | [1..632] | [1..632] |
|
|
0.0 | [1..632] | [1..632] |
|
|
0.0 | [1..632] | [1..632] |
|
|
0.0 | [1..632] | [1..628] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MDTMMLNVRN LFEQLVRRVE ILSEGNEVQF IQLAKDFEDF RKKWQRTDHE LGKYKDLLMK 60
61 AETERSALDV KLKHARNQVD VEIKRRQRAE ADCEKLERQI QLIREMLMCD TSGSIQLSEE 120
121 QKSALAFLNR GQPSSSNAGN KRLSTIDESG SILSDISFD
|
| Detection Method: |  |
| Confidence: | 7.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [160-249] |
1 11 21 31 41 51
| | | | | |
1 KTDESLDWDS SLVKTFKLKK REKRRSTSRQ FVDGPPGPVK KTRSIGSAVD QGNESIVAKT 60
61 TVTVPNDGGP IEAVSTIETV PYWTRSRRKT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [250-345] |
1 11 21 31 41 51
| | | | | |
1 GTLQPWNSDS TLNSRQLEPR TETDSVGTPQ SNGGMRLHDF VSKTVIKPES CVPCGKRIKF 60
61 GKLSLKCRDC RVVSHPECRD RCPLPCIPTL IGTPVK
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1tbnA |
| Description: | NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.79128751898373 | bayes_pls_golite062009 |
| GTPase regulator activity | 2.70614727793157 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 2.68579854252375 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 2.06038764955701 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.9750017471254 | bayes_pls_golite062009 |
| small GTPase regulator activity | 1.95738547986197 | bayes_pls_golite062009 |
| protein binding | 1.29100556128076 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.27693544428588 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 1.09070479183477 | bayes_pls_golite062009 |
| transcription regulator activity | 1.08577758274384 | bayes_pls_golite062009 |
| Ras guanyl-nucleotide exchange factor activity | 0.958295643211986 | bayes_pls_golite062009 |
| GTPase activator activity | 0.717730683557543 | bayes_pls_golite062009 |
| nucleic acid binding | 0.480348726111787 | bayes_pls_golite062009 |
| DNA binding | 0.418154636457321 | bayes_pls_golite062009 |
| enzyme activator activity | 0.298334474872045 | bayes_pls_golite062009 |
|
Region A: Residues: [346-548] |
1 11 21 31 41 51
| | | | | |
1 IGEGMLADFV SQTSPMIPSI VVHCVNEIEQ RGLTETGLYR ISGCDRTVKE LKEKFLRVKT 60
61 VPLLSKVDDI HAICSLLKDF LRNLKEPLLT FRLNRAFMEA AEITDEDNSI AAMYQAVGEL 120
121 PQANRDTLAF LMIHLQRVAQ SPHTKMDVAN LAKVFGPTIV AHAVPNPDPV TMLQDIKRQP 180
181 KVVERLLSLP LEYWSQFMMV EQE
|
| Detection Method: | |
| Confidence: | 42.09691 |
| Match: | 2ovjA |
| Description: | No description for 2ovjA was found. |
|
Region A: Residues: [549-632] |
1 11 21 31 41 51
| | | | | |
1 NIDPLHVIEN SNAFSTPQTP DIKVSLLGPV TTPEHQLLKT PSSSSLSQRV RSTLTKNTPR 60
61 FGSKSKSATN LGRQGNFFAS PMLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
