| Protein: | CCL5_RAT |
| Organism: | Rattus norvegicus |
| Length: | 92 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCL5_RAT.
| Description | E-value | Query Range |
Subject Range |
|
|
114.0 | [0..1] | [92..1] |
|
|
111.0 | [0..1] | [92..1] |
|
|
111.0 | [0..1] | [92..1] |
|
|
110.0 | [0..1] | [92..1] |
|
|
109.0 | [0..1] | [92..1] |
|
|
108.0 | [0..1] | [92..1] |
|
|
108.0 | [0..1] | [92..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MKISAAASLT VILVAAALCT PVPASPYGSD TTPCCFAYLS LALPRAHVKE YFYTSSKCSN 60
61 LAVVFVTRRN RQVCANPEKK WVQEYINYLE MS
|
| Detection Method: |  |
| Confidence: | 19.09691 |
| Match: | 1hrjA |
| Description: | RANTES (regulated upon activation, normal T-cell expressed and secreted) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| cytokine activity | 8.07273475133641 | bayes_pls_golite062009 |
| chemokine receptor binding | 7.19574940007631 | bayes_pls_golite062009 |
| chemokine activity | 7.19574940007631 | bayes_pls_golite062009 |
| G-protein-coupled receptor binding | 7.12866319987718 | bayes_pls_golite062009 |
| receptor binding | 5.70505228637425 | bayes_pls_golite062009 |
| protein binding | 3.96178206863622 | bayes_pls_golite062009 |
| interleukin-8 receptor binding | 3.86135397575984 | bayes_pls_golite062009 |
| binding | 3.44333267537536 | bayes_pls_golite062009 |
| chemoattractant activity | 3.05299139114464 | bayes_pls_golite062009 |
| heparin binding | 2.48790323783525 | bayes_pls_golite062009 |
| glycosaminoglycan binding | 1.80091312295242 | bayes_pls_golite062009 |
| CCR2 chemokine receptor binding | 1.78317158345185 | bayes_pls_golite062009 |
| polysaccharide binding | 1.28416986663426 | bayes_pls_golite062009 |
| pattern binding | 1.02739535268516 | bayes_pls_golite062009 |
| CCR chemokine receptor binding | 0.697359799598971 | bayes_pls_golite062009 |
| carbohydrate binding | 0.14673741350408 | bayes_pls_golite062009 |
| transporter activity | 0.0541029584618528 | bayes_pls_golite062009 |
