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View Structure Prediction Details

Protein: gi|126227924, gi...
Organism: Burkholderia pseudomallei 1106a
Length: 150 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|126227924, gi....

Description E-value Query
Range
Subject
Range
gi|83719706, gi|... - gi|83719706|ref|YP_441711.1| 3-dehydroquinate dehydratase [Burkholderia thailandensis E264], gi|8365...
268.0 [0..1] [150..58]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLLVLHGP NLNLLGTREP EVYGRVTLEQ IDQALAARAQ EAGAELESFQ SNHEGALVDR  60
   61 VQAAGSDGTA FILINPAAYT HTSVAIRDAL AGVGIPFVEI HLSNVHRREP FRHHSYFSDQ 120
  121 AEGVICGLGW KGYLYALEYA LDKLQGASRG 

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Detection Method: PSI-BLAST
Confidence: 65.39794
Match: 1uqrA
Description: Type II 3-dehydroquinate dehydratase (DHQase) from Actinobacillus pleuropneumoniae
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
3-dehydroquinate dehydratase activity 4.89182009956779 bayes_pls_golite062009
catalytic activity 2.05174935916901 bayes_pls_golite062009
lyase activity 1.8611664916998 bayes_pls_golite062009
carbon-oxygen lyase activity 1.85854553303143 bayes_pls_golite062009
hydro-lyase activity 1.7760166106171 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle