| Protein: | gi|125555906 |
| Organism: | Oryza sativa Indica Group |
| Length: | 308 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125555906.
| Description | E-value | Query Range |
Subject Range |
|
|
209.0 | [0..44] | [303..131] |
|
Region A: Residues: [1-308] |
1 11 21 31 41 51
| | | | | |
1 MNDLFSSSSF KKYADASPAS GVGGSDMEAG GEGVVNLDRF FEDVEGVKED MKGLEALYKR 60
61 LQSTNEETKT AHDARAVKAL RSRMDGDVEQ VLRRAKAVKG KLEALDRDNA TSRKVPGCGP 120
121 GSSTDRTRTS VVAGLGKKLK DIMDDFQGLR TRMAAEYKET VARRYYTVTG EKAEDSTIDS 180
181 LIESGESESF LQKAIQEQGR GQVMDTISEI QERHDAVKDI ERSLLDLHQV FLDMAALVEA 240
241 QGHQLNDIES HVAHASSFVR RGTVELEVAR EHQKSSRKWA CVAVLAGIIL IAVLILPVLI 300
301 NLRILTLR
|
| Detection Method: |  |
| Confidence: | 35.522879 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphatidic acid binding | 8.51970136264329 | bayes_pls_golite062009 |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| calcium channel inhibitor activity | 3.28773614634352 | bayes_pls_golite062009 |
| protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
| binding | 2.76125772097759 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.84645272212664 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.62782051964352 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| calcium channel regulator activity | 1.03966990325407 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| extracellular-glutamate-gated ion channel activity | 0.394485000881621 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.29109171472743 | bayes_pls_golite062009 |
| myosin binding | 0.17223293441022 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
