| Protein: | gi|114638257 |
| Organism: | Pan troglodytes |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|114638257.
| Description | E-value | Query Range |
Subject Range |
|
|
5.0E-70 | [3..538] | [502..1020] |
|
|
6.0E-70 | [4..543] | [80..602] |
|
|
7.0E-65 | [2..536] | [354..905] |
|
|
2.0E-57 | [3..534] | [489..1035] |
|
|
3.0E-57 | [4..530] | [401..946] |
|
|
9.0E-57 | [7..533] | [477..1019] |
|
Region A: Residues: [1-122] |
1 11 21 31 41 51
| | | | | |
1 MEQVNELKEK GNKALSVGNI DDALQCYSEA IKLDPHNHVL YSNRSAAYAK KGDYQKAYED 60
61 GCKTVDLKPD WGKGYSRKAA ALEFLNRFEE AKRTYEEGLK HEANNPQLKE GLQNMEARLA 120
121 ER
|
| Detection Method: |  |
| Confidence: | 12.09691 |
| Match: | 1elwA |
| Description: | Hop |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.12690485191789 | bayes_pls_golite062009 |
| protein binding | 1.37554190575452 | bayes_pls_golite062009 |
| heat shock protein binding | 1.35268080101836 | bayes_pls_golite062009 |
| unfolded protein binding | 1.03065657981002 | bayes_pls_golite062009 |
| chaperone binding | 0.677143111475679 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| transcription regulator activity | 0.194719472400022 | bayes_pls_golite062009 |
| DNA binding | 0.17736976899009 | bayes_pls_golite062009 |
|
Region A: Residues: [123-328] |
1 11 21 31 41 51
| | | | | |
1 KFMNPFNMPN LYQKLESDPR TRTLLSDPTY RELIEQLRNK PSDLGTKLQD PRIMTTLSVL 60
61 LGVDLGSMDE EEEIATPPPP PPPKKETKPE PMEEDLPENK KQALKEKELG NDAYKKKDFD 120
121 TALKHYDKAK ELDPTNMTYI TNQAAVYFEK GDYNKCRELC EKAIEVGREN REDYRQIAKA 180
181 YARIGNSYFK EEKYKDAIHF YNKSLA
|
| Detection Method: | |
| Confidence: | 5.43 |
| Match: | 2q7fA |
| Description: | No description for 2q7fA was found. |
|
Region A: Residues: [329-426] |
1 11 21 31 41 51
| | | | | |
1 EHRTPDVLKK CQQAEKILKE QERLAYINPD LALEEKNKGN ECFQKGDYPQ AMKHYTEAIK 60
61 RNPKDAKLYS NRAACYTKLL EFQLALKDCE ECIQLEPT
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1hh8A |
| Description: | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.12690485191789 | bayes_pls_golite062009 |
| protein binding | 1.37554190575452 | bayes_pls_golite062009 |
| heat shock protein binding | 1.35268080101836 | bayes_pls_golite062009 |
| unfolded protein binding | 1.03065657981002 | bayes_pls_golite062009 |
| chaperone binding | 0.677143111475679 | bayes_pls_golite062009 |
| nucleic acid binding | 0.41706917101675 | bayes_pls_golite062009 |
| transcription regulator activity | 0.194719472400022 | bayes_pls_golite062009 |
| DNA binding | 0.17736976899009 | bayes_pls_golite062009 |
|
Region A: Residues: [427-543] |
1 11 21 31 41 51
| | | | | |
1 FIKGYTRKAA ALEAMKDYTK AMDVYQKALD LDSSCKEAAD GYQRCMMAQY NRHDSPEDVK 60
61 RRAMADPEVQ QIMSDPAMRL ILEQMQKDPQ ALSEHLKNPV IAQKIQKLMD VGLIAIR
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1zbpA |
| Description: | Crystal Structure of the Hypothetical protein VPA1032 from Vibrio parahaemolyticus, Northeast Structural Genomics Target VpR44 |
Matching Structure (courtesy of the PDB): |
|
