YRC Public Data Repository - Protein Structure Prediction

Protein:	NDUA7_MOUSE
Organism:	Mus musculus
Length:	113 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUA7_MOUSE.

Description	E-value	Query Range	Subject Range
gi\|81294173 - gi\|81294173\|gb\|AAI07893.1\| NDUFA7 protein [Homo sapiens]	197.0	[0..1]	[113..9]
gi\|111662311 - gi\|111662311\|gb\|ABH12236.1\| mitochondrial complex I subunit NDUFA7 [Gorilla gorilla]	195.0	[0..1]	[113..6]
NDUA7_GORGO - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Gorilla gorilla gorilla GN=NDUFA7 PE...	194.0	[0..1]	[113..1]
gi\|111662313 - gi\|111662313\|gb\|ABH12237.1\| mitochondrial complex I subunit NDUFA7 [Pongo pygmaeus]	194.0	[0..1]	[113..6]
NDUA7_BOVIN - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Bos taurus GN=NDUFA7 PE=1 SV=2	194.0	[0..1]	[113..1]
gi\|109468302, gi... - ref\|XP_345370.1\| similar to NADH oxidoreductase [Rattus norvegicus], gi\|109470085\|ref\|XP_001061418.1...	193.0	[0..1]	[113..1]

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Predicted Domain #1

Region A:
Residues: [1-113]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATRVIQK LRNWASGQDL QAKLQLRYQE IAKRTQPPPK LPVGPSHKLS NNYYCTRDGR  60
   61 REVVPPSIIM SSQKALVSGK AAESSAMAAT EKKAVTPAPP MKRWELSKDQ PYL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	76.721246
Match:	PF07347.3
Description:	No description for PF07347.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits