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View Structure Prediction Details

Protein: NDUA7_MOUSE
Organism: Mus musculus
Length: 113 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUA7_MOUSE.

Description E-value Query
Range
Subject
Range
gi|81294173 - gi|81294173|gb|AAI07893.1| NDUFA7 protein [Homo sapiens]
197.0 [0..1] [113..9]
gi|111662311 - gi|111662311|gb|ABH12236.1| mitochondrial complex I subunit NDUFA7 [Gorilla gorilla]
195.0 [0..1] [113..6]
NDUA7_GORGO - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Gorilla gorilla gorilla GN=NDUFA7 PE...
194.0 [0..1] [113..1]
gi|111662313 - gi|111662313|gb|ABH12237.1| mitochondrial complex I subunit NDUFA7 [Pongo pygmaeus]
194.0 [0..1] [113..6]
NDUA7_BOVIN - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 OS=Bos taurus GN=NDUFA7 PE=1 SV=2
194.0 [0..1] [113..1]
gi|109468302, gi... - ref|XP_345370.1| similar to NADH oxidoreductase [Rattus norvegicus], gi|109470085|ref|XP_001061418.1...
193.0 [0..1] [113..1]

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Predicted Domain #1
Region A:
Residues: [1-113]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATRVIQK LRNWASGQDL QAKLQLRYQE IAKRTQPPPK LPVGPSHKLS NNYYCTRDGR  60
   61 REVVPPSIIM SSQKALVSGK AAESSAMAAT EKKAVTPAPP MKRWELSKDQ PYL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 76.721246
Match: PF07347.3
Description: No description for PF07347.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.303 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.299 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.298 N/A N/A a.79.1 Antitermination factor NusB
View Download 0.294 N/A N/A a.79.1 Antitermination factor NusB
View Download 0.273 N/A N/A a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.258 N/A N/A a.47.1 STAT
View Download 0.250 N/A N/A a.7.1 Spectrin repeat
View Download 0.236 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.202 N/A N/A f.14.1 Voltage-gated potassium channels


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