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View Structure Prediction Details

Protein: LALBA_MOUSE
Organism: Mus musculus
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LALBA_MOUSE.

Description E-value Query
Range		 Subject
Range
LYSC_ERYPA - Lysozyme C OS=Erythrocebus patas GN=LYZ PE=3 SV=1
LYSC_CHLAE - Lysozyme C OS=Chlorocebus aethiops GN=LYZ PE=2 SV=1
 210.0 [0..1] [139..1]
LYSC_MACMU - Lysozyme C OS=Macaca mulatta GN=LYZ PE=2 SV=1
 208.0 [0..1] [139..1]
LYSC_PAPAN - Lysozyme C OS=Papio anubis GN=LYZ PE=1 SV=1
LYSC_CERAT - Lysozyme C OS=Cercocebus atys GN=LYZ PE=2 SV=1
 208.0 [0..1] [139..1]
LALBA_CANLF - Alpha-lactalbumin OS=Canis lupus familiaris GN=LALBA PE=2 SV=1
 207.0 [0..1] [142..1]
LYSC_ALLNI - Lysozyme C OS=Allenopithecus nigroviridis GN=LYZ PE=3 SV=1
 206.0 [0..1] [139..1]
gi|295774, gi|75... - gi|7542833|gb|AAF63624.1|AF249896_1 alpha lactalbumin [Bos taurus], gi|295774|emb|CAA29664.1| alpha-...
 206.0 [0..1] [142..1]
gi|123982912, gi... - gi|123997593|gb|ABM86398.1| lysozyme (renal amyloidosis) [synthetic construct], gi|123982912|gb|ABM8...
LYZ - lysozyme
LYSC_PANPA - Lysozyme C OS=Pan paniscus GN=LYZ PE=3 SV=1
LYSC_PANTR - Lysozyme C OS=Pan troglodytes GN=LYZ PE=2 SV=1
 206.0 [0..1] [139..1]
LYSC_PONPY - Lysozyme C OS=Pongo pygmaeus GN=LYZ PE=2 SV=1
 206.0 [0..1] [139..1]
LYSC_MIOTA - Lysozyme C OS=Miopithecus talapoin GN=LYZ PE=3 SV=1
 205.0 [0..1] [139..1]
LYSC_COLAN - Lysozyme C OS=Colobus angolensis GN=LYZ PE=3 SV=1
LYSC_COLGU - Lysozyme C OS=Colobus guereza GN=LYZ PE=2 SV=1
 205.0 [0..1] [139..1]

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Predicted Domain #1
Region A:
Residues: [1-143] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHFVPLFLV CILSLPAFQA TELTKCKVSH AIKDIDGYQG ISLLEWACVL FHTSGYDTQA  60
   61 VVNDNGSTEY GLFQISDRFW CKSSEFPESE NICGISCDKL LDDELDDDIA CAKKILAIKG 120
  121 IDYWKAYKPM CSEKLEQWRC EKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.0
Match: 1hmlA
Description: ALPHA_LACTALBUMIN POSSESSES A DISTINCT ZINC BINDING SITE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lysozyme activity 2.92895503832101 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.19773407498586 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.96160938846041 bayes_pls_golite062009
catalytic activity 1.5828442141425 bayes_pls_golite062009
penicillin binding 1.50909011505977 bayes_pls_golite062009
protein binding 1.08073077929654 bayes_pls_golite062009
drug binding 0.905681096612574 bayes_pls_golite062009
binding 0.887267359956298 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.129651578108655 bayes_pls_golite062009
polysaccharide binding 0.00563187712637614 bayes_pls_golite062009
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