| Protein: | gi|1220404, gi|6... |
| Organism: | Mus musculus |
| Length: | 234 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1220404, gi|6....
| Description | E-value | Query Range |
Subject Range |
|
|
189.0 | [0..9] | [234..10] |
|
|
180.0 | [0..1] | [232..278] |
|
|
180.0 | [0..1] | [232..317] |
|
|
179.0 | [0..1] | [232..317] |
|
|
179.0 | [0..1] | [232..307] |
|
|
179.0 | [0..1] | [234..398] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MGAETMESPS LFLCKGLLLT AFLLTCWNAP AAAELTIELV PPMVAEGGNS VLFVHEMPLN 60
61 VQAFYWYKQR DSTKSYEVAR YLTPTNQSSK MPQHSDRKTV FYSGSLLIRN VTKADSGVYT 120
121 LLTFNTEMES ELTHVHLEVQ EPVAQPTLQA DSTAVTEAGS VTLTCVSEDP GLSIRWLFNH 180
181 QGLYFNDRMT LSQKNSRLTI DPAKREDAGE YQCEVSNGYS SKMSLPLQMS VTSE
|
| Detection Method: |  |
| Confidence: | 36.69897 |
| Match: | 1l6zA |
| Description: | Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), N-terminal domain; Biliary glycoprotein C (CD66a, CEACAM1A[1,4]), C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.8115779583504 | bayes_pls_golite062009 |
| antigen binding | 0.960778837625966 | bayes_pls_golite062009 |
| protein binding | 0.938987915365819 | bayes_pls_golite062009 |
| receptor activity | 0.455706310643829 | bayes_pls_golite062009 |
