| Protein: | STX1B_MOUSE |
| Organism: | Mus musculus |
| Length: | 288 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STX1B_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..36] | [287..131] |
|
|
190.0 | [0..11] | [262..19] |
|
|
185.0 | [0..1] | [287..11] |
|
|
181.0 | [0..1] | [287..1] |
|
|
180.0 | [0..1] | [287..1] |
|
|
179.0 | [0..1] | [287..1] |
|
|
178.0 | [0..1] | [288..1] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MKDRTQELRS AKDSDDEEEV VHVDRDHFMD EFFEQVEEIR GCIEKLSEDV EQVKKQHSAI 60
61 LAAPNPDEKT KQELEDLTAD IKKTANKVRS KLKAIEQSIE QEEGLNRSSA DLRIRKTQHS 120
121 TLSRKFVEVM TEYNATQSKY RDRCKDRIQR QLEITGRTTT NEELEDMLES GKLAIFTDDI 180
181 KMDSQMTKQA LNEIETRHNE IIKLETSIRE LHDMFVDMAM LVESQGEMID RIEYNVEHSV 240
241 DYVERAVSDT KKAVKYQSKA RRKKIMIIIC CVVLGVVLAS SIGGTLGL
|
| Detection Method: |  |
| Confidence: | 33.522879 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphatidic acid binding | 8.51970136264329 | bayes_pls_golite062009 |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
| binding | 2.76125772097759 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.62782051964352 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.37325757539281 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| calcium channel regulator activity | 1.03966990325407 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| extracellular-glutamate-gated ion channel activity | 0.394485000881621 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.29109171472743 | bayes_pls_golite062009 |
| myosin binding | 0.17223293441022 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
