| Protein: | FRDA_MOUSE |
| Organism: | Mus musculus |
| Length: | 207 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRDA_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
322.0 | [0..1] | [207..1] |
|
|
321.0 | [0..1] | [207..1] |
|
|
316.0 | [0..1] | [205..1] |
|
|
307.0 | [0..1] | [205..1] |
|
|
304.0 | [0..1] | [205..1] |
|
|
303.0 | [0..1] | [205..1] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MWAFGGRAAV GLLPRTASRA SAWVGNPRWR EPIVTCGRRG LHVTVNAGAT RHAHLNLHYL 60
61 QILNIKKQSV CVVHL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.599 | N/A | N/A | g.41.9 | RBP12 subunit of RNA polymerase II |
| View | Download | 0.467 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.441 | N/A | N/A | d.15.7 | Immunoglobulin-binding domains |
| View | Download | 0.346 | N/A | N/A | b.38.1 | Sm-like ribonucleoproteins |
| View | Download | 0.340 | N/A | N/A | b.92.1 | Composite domain of metallo-dependent hydrolases |
|
Region A: Residues: [76-207] |
1 11 21 31 41 51
| | | | | |
1 RNLGTLDNPS SLDETAYERL AEETLDSLAE FFEDLADKPY TLEDYDVSFG DGVLTIKLGG 60
61 DLGTYVINKQ TPNKQIWLSS PSSGPKRYDW TGKNWVYSHD GVSLHELLAR ELTKALNTKL 120
121 DLSSLAYSGK GT
|
| Detection Method: | |
| Confidence: | 47.221849 |
| Match: | 1ekgA |
| Description: | C-terminal domain of frataxin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| iron chaperone activity | 4.16905358201916 | bayes_pls_golite062009 |
| ferric iron binding | 3.23865994858009 | bayes_pls_golite062009 |
| iron ion binding | 2.78584553912929 | bayes_pls_golite062009 |
| 2 iron, 2 sulfur cluster binding | 2.25545886640675 | bayes_pls_golite062009 |
| transition metal ion binding | 1.85229574432416 | bayes_pls_golite062009 |
| binding | 1.75179885686234 | bayes_pls_golite062009 |
| metallochaperone activity | 1.67572555512957 | bayes_pls_golite062009 |
| ferrous iron binding | 1.61332056179381 | bayes_pls_golite062009 |
| protein binding | 1.50639308293007 | bayes_pls_golite062009 |
| cation binding | 1.42164579673909 | bayes_pls_golite062009 |
| metal ion binding | 1.42164579673909 | bayes_pls_golite062009 |
| ion binding | 1.4150396069236 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.07282105096776 | bayes_pls_golite062009 |
| metal cluster binding | 0.602901470550009 | bayes_pls_golite062009 |
| iron-sulfur cluster binding | 0.602901470550009 | bayes_pls_golite062009 |
| oxidoreductase activity, oxidizing metal ions, oxygen as acceptor | 0.310374472796773 | bayes_pls_golite062009 |
| ferroxidase activity | 0.310374472796773 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
