| Protein: | gi|3123708, gi|9... |
| Organism: | Mus musculus |
| Length: | 288 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3123708, gi|9....
| Description | E-value | Query Range |
Subject Range |
|
|
207.0 | [0..36] | [287..131] |
|
|
192.0 | [0..11] | [262..19] |
|
|
186.0 | [0..1] | [287..11] |
|
|
183.0 | [0..1] | [287..1] |
|
|
181.0 | [0..1] | [276..1] |
|
|
180.0 | [0..1] | [287..1] |
|
|
178.0 | [0..1] | [287..1] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MKEWTQERRS AKDSDDEEEV VHVDRAHFMA EFFEQVEEIR GCIEKLSEDV GRVGGQHSAI 60
61 LAAPKPDEKT KQELEDLTAD IKKTANKVRS KLKAIEQGIE QEEGLNRSSA DLRYRTTQHS 120
121 TVSRNFVEVM TEYNATKSKY RDRCKDRLQR QLEITGRTTT NEELEDMLES GKLAIFTDDI 180
181 KMDSQMTKQA RNEIETRHNE IIKLETSIRE LHDMFVDMAM LVESQGEMID RIEYNVEHSV 240
241 DYVERAVSDT KKAVKYQSKA RRKKIMIIIC CVVLGVVLAS SIGGTLGL
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 1dn1B |
| Description: | Syntaxin 1A N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphatidic acid binding | 8.51970136264329 | bayes_pls_golite062009 |
| SNAP receptor activity | 3.50393203740159 | bayes_pls_golite062009 |
| protein transporter activity | 2.96543140800925 | bayes_pls_golite062009 |
| binding | 2.76125772097759 | bayes_pls_golite062009 |
| protein binding | 2.66728689880621 | bayes_pls_golite062009 |
| SNARE binding | 1.85060343142976 | bayes_pls_golite062009 |
| transporter activity | 1.74189664015129 | bayes_pls_golite062009 |
| myosin head/neck binding | 1.62782051964352 | bayes_pls_golite062009 |
| extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| excitatory extracellular ligand-gated ion channel activity | 1.54368755758216 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.49085442233849 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.37325757539281 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.13101548288086 | bayes_pls_golite062009 |
| calcium channel regulator activity | 1.03966990325407 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.643064875848901 | bayes_pls_golite062009 |
| gated channel activity | 0.621670335227137 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.41937155561589 | bayes_pls_golite062009 |
| extracellular-glutamate-gated ion channel activity | 0.394485000881621 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.370484918396857 | bayes_pls_golite062009 |
| myosin heavy chain binding | 0.29109171472743 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.0647076360772156 | bayes_pls_golite062009 |
| channel activity | 0.0647076360772156 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.0435980899803177 | bayes_pls_golite062009 |
| phospholipid binding | 0.0172309833091902 | bayes_pls_golite062009 |
