| Protein: | ARP5_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 721 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARP5_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
418.0 | [0..7] | [362..297] |
|
|
412.0 | [0..18] | [362..28] |
|
|
411.0 | [0..22] | [362..212] |
|
|
410.0 | [0..21] | [362..1] |
|
|
409.0 | [0..20] | [362..1] |
|
|
408.0 | [0..22] | [362..5] |
|
|
408.0 | [0..22] | [362..4] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MKIYAVREPV FSGPTPSFQN VSNDIPLVID NGSWQLRAGW GGEKDPKLVF DNLVSRYRDR 60
61 KLSRTSTLVG NDTLIEVGSR SIARSPFERN VISNWDLMEQ VLDYTFLKLG IDRMEHPICM 120
121 TEPLANPTYV RSTMTELLFE LYNAPSVAYG IDGLFSFYHN TKPSSSGIVL NLGNAASHVI 180
181 PVLNGER
|
| Detection Method: |  |
| Confidence: | 114.0 |
| Match: | 1nlvA |
| Description: | Actin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 3.49917339467744 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 3.14961582364442 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 3.11425505645918 | bayes_pls_golite062009 |
| DNA helicase activity | 2.92189100911743 | bayes_pls_golite062009 |
| myosin binding | 2.53108346927043 | bayes_pls_golite062009 |
| actin filament binding | 2.01821925799878 | bayes_pls_golite062009 |
| binding | 1.97067859459221 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.59975673209166 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.59975673209166 | bayes_pls_golite062009 |
| protein binding | 0.979596124775086 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.726191454623287 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.654083598964358 | bayes_pls_golite062009 |
| structural molecule activity | 0.592226835455977 | bayes_pls_golite062009 |
| nucleosome binding | 0.329990231856661 | bayes_pls_golite062009 |
| transcription coactivator activity | 0.181830769846903 | bayes_pls_golite062009 |
| kinase activity | 0.123127976437259 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0670632180760572 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.0571907728331915 | bayes_pls_golite062009 |
| chromatin binding | 0.0424425838189793 | bayes_pls_golite062009 |
| 5'-3' DNA helicase activity | 0.0183211661451317 | bayes_pls_golite062009 |
| ATP-dependent 5'-3' DNA helicase activity | 0.0183211661451317 | bayes_pls_golite062009 |
|
Region A: Residues: [188-582] |
1 11 21 31 41 51
| | | | | |
1 ILSEAKRISW GGSQSSSYLL KLFQIKYPSF PIKMLPSQAE LLMHDHCHVS SDYTHDIAHA 60
61 LDRDILERDE IVLQFPYTEA AAQEKSQEEL ELIAERKRES GRRLQAQAAI KRKEKAAERD 120
121 RELATLTELQ QQSLVLSRRA FQRALEEAGF EDESQLNAQV KNVQAKIRRA QRDQQRQEES 180
181 EGSLDVTEID VEQAFPLLNV PDAELDEAGL RQKRHQRLMK ANYDARVRAK AEKAIEEAAE 240
241 AERAEADERL RLENFSTWVN EKRETHKILL EKISKNKRLK FELNDRKSHA SQMRMKSLAT 300
301 LASEQPIQKR KRKDQSEDNF GARDEDWKVY HDVLTAEQLE EERKKLLDQI YSLEKQLLEY 360
361 DSQFTQANTY DTLNDPRATL LYAFTRGVSD FDVND
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [583-721] |
1 11 21 31 41 51
| | | | | |
1 VAQAFQLHLN VEQIRVPEVI FSPSIVGIDQ AGILEIMRSI LQRHSLEEQQ KLVSNVLITG 60
61 GLGSLPGMET RIKRELTSIM PVGSSINVFR ASNPLLDAWK GASEWSVTEK FKAAKVTREE 120
121 YLEKGPEYIK EHSLGNINS
|
| Detection Method: | |
| Confidence: | 5.81 |
| Match: | 1eqyA |
| Description: | Actin |
Matching Structure (courtesy of the PDB): |
|
