| Protein: | YKR3_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKR3_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
433.0 | [0..14] | [793..25] |
|
|
433.0 | [0..14] | [793..25] |
|
|
433.0 | [0..62] | [793..44] |
|
|
432.0 | [0..14] | [793..25] |
|
|
422.0 | [0..14] | [793..25] |
|
|
421.0 | [0..111] | [793..141] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MQNEYVDMNS SSEDSDGDSI LEEGRLRPSF RGQQKERDML GIFGEEDEDG FHNSGIGSAR 60
61 LRRKNISFVE KSEQVKANK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-449] |
1 11 21 31 41 51
| | | | | |
1 QVTADDLLEA HSIPQLKNKN DEVSQAKNIP KMKFNTTGFG AKMLEKMGYK QGQGLGANAE 60
61 GIAEPVQSKL RPERVGLGAV RERTEKQRKE AIARGEISDS EDEKHTVKQK PLREKKKKPL 120
121 KSSEEISKDM GSYNLPRFLA SLIDASLNDT KEIEFVTSNK EELGLEGRDM STSGINQLSR 180
181 LARVECEHHA SAWQQLQARR AYVKMELKRV TTEFDEKSVE ISRLEKLLGK VMEVKSRSME 240
241 FTVPEAEIDV IEKRLQPLNN LIETLPVEFS EASMHFELDS VAVSILAFVL SEPIKNWDVW 300
301 KHPYFMLESF LSWKNSLYSK DFRPKREESS TFMDIDVEFD DELEGQSLTH YESFMMFVWK 360
361 KKIGEELKKW
|
| Detection Method: | |
| Confidence: | 20.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [450-538] |
1 11 21 31 41 51
| | | | | |
1 IIQDSLKALQ LLEAWDPVVP EKVKDSLIQD DILPRLKDAV SKWNPKLKLK KNDSLHHCIF 60
61 PWLPYLEKHA DSLLQSVLVQ FSLILSPWK
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [539-688] |
1 11 21 31 41 51
| | | | | |
1 IKNGSIDDFS VWRSAFANDA LDRLLEKVIL PKLEKLMDEE LVIDPSNQDL EIFFIILSWK 60
61 GSFKAMVFGQ LFADHFFPKW LETLYQWLTE APNFDEASEW YTWWKSVFPK DLLSNAYIQQ 120
121 GFSKGLDMMN ECLENKSITA PLPFAKDSTK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [689-797] |
1 11 21 31 41 51
| | | | | |
1 GVNLQFSKEK HEFTAESDDT TSYDEPLVSF RELVEEFCAE NSLLFVPLRR SHLSTGSALF 60
61 RISTQASKAR GITVYLRNDI IWKKSPGASE DTPYDPIGFN EILLMFNNN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.804 | 0.037 | nuclear mRNA splicing, via spliceosome | d.129.1 | TATA-box binding protein-like |
