| Protein: | PLD1_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 1369 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLD1_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
1074.0 | [0..35] | [1369..2] |
|
|
1073.0 | [0..35] | [1369..2] |
|
|
1049.0 | [0..62] | [1333..702] |
|
|
1044.0 | [0..35] | [1341..2] |
|
|
1036.0 | [0..57] | [1303..279] |
|
|
1031.0 | [0..35] | [1369..2] |
|
|
1028.0 | [0..58] | [1314..274] |
|
|
1027.0 | [0..63] | [1302..123] |
|
Region A: Residues: [1-175] |
1 11 21 31 41 51
| | | | | |
1 MTIHQGGNSV IDNVPYSLNT NVNDSIYSEK GTGRKDAEDH TPSKITDLEK NVDHSIPSFP 60
61 ENDPKNYSEF VNLNPPKRPD LEHTRGSSWH TASENVNDLA ANDSTRVQTP EFITQTMEDE 120
121 NVEVPPLERD ERDAAAAHTS KANRNSARQM WAQLMASVRK FKREDEKPIL KENLP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [176-525] |
1 11 21 31 41 51
| | | | | |
1 AINLFEAGIP ASLPIAKHFI RDKSGQPVLP IITDLIKVSV LDVEPKHNRI HSTFTIQVEY 60
61 GTGPHAIRWL IYRQLRDFIN LHSHFLFFEF QHRFSGRRMK LPKFPKEVLP YLVKLRGYQK 120
121 ILYSNPSDQL IDETHSISDI SWESHSQDGD RTTGQPRHAN NGRKKHGNFW TIQGNTLGVY 180
181 LQEMIHNLQF FPEVNVLYSF LEFSSLGLYL AGAGTFHGKE GFATLKRNYS PTQYMLCCNT 240
241 TMMKTRSQPF WIIVSESCII LCDNMLSMQP ADVFIWDVDF EITRKNFRKA HSKDTNEKIR 300
301 LSHHSFKIKN RQKVMKLSVR SGRWLQQFIN SVQVAQGLTA WCEIHRFDSF
|
| Detection Method: | |
| Confidence: | 3.44 |
| Match: | 1u5eA |
| Description: | Crystal Structure of a N-terminal Fragment of SKAP-Hom Containing Both the Helical Dimerization Domain and the PH Domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.0857989342765 | bayes_pls_golite062009 |
| protein binding | 1.98056222560389 | bayes_pls_golite062009 |
| transporter activity | 1.29925758003665 | bayes_pls_golite062009 |
| phospholipid binding | 0.864843473490307 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.552872712432362 | bayes_pls_golite062009 |
| phosphoinositide binding | 0.45899353522401 | bayes_pls_golite062009 |
| protein domain specific binding | 0.432003190263252 | bayes_pls_golite062009 |
|
Region A: Residues: [526-1023] |
1 11 21 31 41 51
| | | | | |
1 APVRTNVAVQ WMVDARDHMW NVSRAIKNAK RCIMIHGWWL SPELQMRRPY SMAHKWRIDR 60
61 ILNEKAHEGV MVYIMIYRNI DATIPIDSFH TKEHLQSLHP NIYVIRSPSH FRQNALFWAH 120
121 HEKLVVVDDA ITFIGGIDLC FGRYDTPQHI LYDDKPVADK TGLCEQTWRG KDYSNARVHD 180
181 FFDLTEPYKD MYDRLAVPRM GWHDVSMCII GQPARDAARH FVQRWNYLIQ CKKPARKTPL 240
241 LIPPPDFTTD QLTDSQLTGT CEVQVLRSAG LWSLGLVDTV EQSIQNAYVT CIEKSEHFIY 300
301 IENQFFVTST TCEGTTIENR VGDALVERII RAHKNNEKWR GVIMIPLLPG FEGQIDLQEG 360
361 GSLRLIVECQ YRSICHGEHS IFGRLNAKGI DGSKYLRFYG LRGWAHLGEN HELVTEMIYV 420
421 HAKILIADDR VAVIGSANIN ERSLLGNRDS EIAAVIRDTL TIDSKMDGKP YKVGKFAHTL 480
481 RKRLMREHLG LETDVLEQ
|
| Detection Method: | |
| Confidence: | 36.154902 |
| Match: | 1f0iA |
| Description: | Phospholipase D |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| phosphoric diester hydrolase activity | 1.55477881010087 | bayes_pls_golite062009 |
| catalytic activity | 1.29236214516383 | bayes_pls_golite062009 |
| phosphoric ester hydrolase activity | 0.97354820978871 | bayes_pls_golite062009 |
| binding | 0.782852985815333 | bayes_pls_golite062009 |
| protein binding | 0.438178121330569 | bayes_pls_golite062009 |
| transferase activity | 0.417847571627092 | bayes_pls_golite062009 |
| kinase activity | 0.41582825017763 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.398900256450913 | bayes_pls_golite062009 |
|
Region A: Residues: [1024-1073] |
1 11 21 31 41 51
| | | | | |
1 REYNMDGLDR DTEWKRVEVW TPDEGNAING SAYTAEELKM KYRSQSQFTT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1074-1284] |
1 11 21 31 41 51
| | | | | |
1 TPDILRKAEK SMKKLDQRVS LIPSSIEFNI KTQKDKVEFE KNYEKSKKGP DVIANALVGG 60
61 IPLSLKTKED SLYELSKFSQ CGEDQRPMVL KDPDHLVPEP SRPHCGNGLV FYDDIPLLEV 120
121 NPISGETIPK FDASSFEDPV CDEFFEDIWS KVASNNTTIY RHIFRCVPDD EMLTWESYNE 180
181 WKKYGKRFKE EQARWRQEEL SNLHETHEKS E
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1285-1369] |
1 11 21 31 41 51
| | | | | |
1 NDPKNPKAGS QGSGNTSASE DSKTEKPKTR TNNGLQVPDK RVVYDLLRGI RGQLVELPLK 60
61 WMSTESNARN WLSSIDKIPP LEIYD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
