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View Structure Prediction Details

Protein: SLU7_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLU7_SCHPO.

Description E-value Query
Range
Subject
Range
gi|73954102 - gi|73954102|ref|XP_536446.2| PREDICTED: similar to step II splicing factor SLU7 [Canis familiaris]
438.0 [0..8] [357..62]
gi|38173911 - gi|38173911|gb|AAH60954.1| Slu7 protein [Mus musculus]
435.0 [0..8] [357..15]
gi|76623713 - gi|76623713|ref|XP_883739.1| PREDICTED: similar to step II splicing factor SLU7 isoform 3 [Bos tauru...
435.0 [0..8] [357..15]
gi|38328492 - gi|38328492|gb|AAH62243.1| Slu7 protein [Rattus norvegicus]
431.0 [0..8] [357..15]
SLU7 - SLU7 splicing factor homolog (S. cerevisiae)
430.0 [0..8] [357..15]

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Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYMNNTFQS NYDYSKDKNF MSTDIGPSMR EMKAQKRRSR PMDNPDADNP YIPKFISTAP  60
   61 WYAQDDDAVE RLAHQRIGKK ETPSGGRSSI EGSWYVRGKK LGPAATKYRK GACENCGAMS 120
  121 HKVKDCMERP RKRGARWTGE DIQADEVIQD INVSWDAKRD RWNGYDATDY KKVIERYEKL 180
  181 DELQNKGEEN RDASENSAVK ASRNSTVSGS EDSASIT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [218-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSLRMREDV VAYLRADNKN LQYEPKSRSM RDETGYHMVD DSSGGAGFVK ASGGEKEDFE  60
   61 KLQMFAWEAE RS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [290-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTRVHVVANP TAGELEFRKN KASRMTTQKH IDQSILDRYG DGTSKVKDKK AKNNEKEVPD  60
   61 LAILDKSEKS KGESNTDEES ENLVIVEGDL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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