YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SLU7_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 379 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLU7_SCHPO.

Description E-value Query
Range
Subject
Range
gi|73954102 - gi|73954102|ref|XP_536446.2| PREDICTED: similar to step II splicing factor SLU7 [Canis familiaris]
438.0 [0..8] [357..62]
gi|38173911 - gi|38173911|gb|AAH60954.1| Slu7 protein [Mus musculus]
435.0 [0..8] [357..15]
gi|76623713 - gi|76623713|ref|XP_883739.1| PREDICTED: similar to step II splicing factor SLU7 isoform 3 [Bos tauru...
435.0 [0..8] [357..15]
gi|38328492 - gi|38328492|gb|AAH62243.1| Slu7 protein [Rattus norvegicus]
431.0 [0..8] [357..15]
SLU7 - SLU7 splicing factor homolog (S. cerevisiae)
430.0 [0..8] [357..15]

Back

Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYMNNTFQS NYDYSKDKNF MSTDIGPSMR EMKAQKRRSR PMDNPDADNP YIPKFISTAP  60
   61 WYAQDDDAVE RLAHQRIGKK ETPSGGRSSI EGSWYVRGKK LGPAATKYRK GACENCGAMS 120
  121 HKVKDCMERP RKRGARWTGE DIQADEVIQD INVSWDAKRD RWNGYDATDY KKVIERYEKL 180
  181 DELQNKGEEN RDASENSAVK ASRNSTVSGS EDSASIT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [218-289]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSLRMREDV VAYLRADNKN LQYEPKSRSM RDETGYHMVD DSSGGAGFVK ASGGEKEDFE  60
   61 KLQMFAWEAE RS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [290-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTRVHVVANP TAGELEFRKN KASRMTTQKH IDQSILDRYG DGTSKVKDKK AKNNEKEVPD  60
   61 LAILDKSEKS KGESNTDEES ENLVIVEGDL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle