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View Structure Prediction Details

Protein: MYOG_MOUSE
Organism: Mus musculus
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYOG_MOUSE.

Description E-value Query
Range
Subject
Range
gi|21071082, gi|... - gi|3023093|gb|AAC12644.1| myogenin [Rattus norvegicus], gi|21071082|ref|NP_058811.2| myogenin [Rattu...
219.0 [0..1] [224..1]
gi|93102313 - gi|93102313|dbj|BAE93440.1| myogenin [Bos taurus]
214.0 [0..1] [224..1]
gi|60097953, gi|... - gi|60097953|ref|NP_001012406.1| myogenin [Sus scrofa], gi|58531946|gb|AAW78688.1| myogenin [Sus scro...
211.0 [0..1] [224..1]
gi|60653163, gi|... - gi|60653165|gb|AAX29277.1| myogenin [synthetic construct], gi|60653163|gb|AAX29276.1| myogenin [synt...
207.0 [0..1] [224..1]
MYOG - myogenin (myogenic factor 4)
gi|208966814, gi... - gi|60656217|gb|AAX32672.1| myogenin [synthetic construct], gi|60656215|gb|AAX32671.1| myogenin [synt...
207.0 [0..1] [224..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELYETSPYF YQEPHFYDGE NYLPVHLQGF EPPGYERTEL SLSPEARGPL EEKGLGTPEH  60
   61 CPGQCLPWAC KVCK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.309804
Match: PF01586.7
Description: No description for PF01586.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKSVSVDRRR AATLREKRRL KKVNEAFEAL KRSTLLNPNQ RLPKVEILRS AIQYIERLQA  60
   61 LLSSLNQEER D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.39794
Match: 1mdyA
Description: Myod B/HLH domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [146-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRYRGGGGPQ PMVPSECNSH SASCSPEWGN ALEFGPNPGD HLLAADPTDA HNLHSLTSIV  60
   61 DSITVEDMSV AFPDETMPN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle