Protein: | NECP1_MOUSE |
Organism: | Mus musculus |
Length: | 275 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NECP1_MOUSE.
Description | E-value | Query Range |
Subject Range |
|
488.0 | [0..1] | [275..1] |
|
485.0 | [0..1] | [275..1] |
|
485.0 | [0..1] | [275..1] |
|
484.0 | [0..1] | [275..1] |
|
481.0 | [0..2] | [274..1] |
|
481.0 | [0..1] | [275..1] |
|
480.0 | [0..1] | [275..1] |
Region A: Residues: [1-135] |
1 11 21 31 41 51 | | | | | | 1 MAAELEYESV LCVKPDVSVY RIPPRASNRG YRASDWKLDQ PDWTGRLRIT SKGKIAYIKL 60 61 EDKVSGELFA QAPVEQYPGI AVETVTDSSR YFVIRIQDGT GRSAFIGIGF TDRGDAFDFN 120 121 VSLQDHFKWV KQETE |
Detection Method: | ![]() |
Confidence: | 73.69897 |
Match: | 1tqzA |
Description: | Solution structure of NECAP1 protein |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 2.71359450116612 | bayes_pls_golite062009 |
clathrin binding | 2.40957758416782 | bayes_pls_golite062009 |
protein binding | 2.32907126599643 | bayes_pls_golite062009 |
transporter activity | 1.28986800087234 | bayes_pls_golite062009 |
phospholipid binding | 1.09683218092034 | bayes_pls_golite062009 |
substrate-specific transporter activity | 0.79883446648737 | bayes_pls_golite062009 |
protein domain specific binding | 0.75677415006638 | bayes_pls_golite062009 |
phosphoinositide binding | 0.71817045430443 | bayes_pls_golite062009 |
cytoskeletal protein binding | 0.268141992393579 | bayes_pls_golite062009 |
lipid binding | 0.179561240451969 | bayes_pls_golite062009 |
pyrophosphatase activity | 0.0611639610381174 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides | 0.0524559849408587 | bayes_pls_golite062009 |
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0498422520006935 | bayes_pls_golite062009 |
actin binding | 0.0485598963526399 | bayes_pls_golite062009 |
Region A: Residues: [136-275] |
1 11 21 31 41 51 | | | | | | 1 ISKESQEMDN RPKLDLGFKE GQTIKLSIGN ITAKKGGASK PRASGTGGLS LLPPPPGGKV 60 61 TIPPPSSSVA ISNHVTPPPI PKSNHGGNDS DILLDLDSPA PVSTSAPAPV STSNDLWGDF 120 121 STASSSVPNQ APQPSNWVQF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.