| Protein: | gi|109451272, gi... |
| Organism: | synthetic construct |
| Length: | 773 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|109451272, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..773] | [1..773] |
|
|
0.0 | [1..773] | [1..783] |
|
|
0.0 | [1..773] | [1..773] |
|
|
0.0 | [20..708] | [1..689] |
|
|
0.0 | [1..773] | [1..763] |
|
|
0.0 | [1..773] | [1..775] |
|
Region A: Residues: [1-237] |
1 11 21 31 41 51
| | | | | |
1 METDESPSPL PCGPAGEAVM ESRARPFQAL PREQSPPPPL QTSSGAEVMD VGSGGDGQSE 60
61 LPAEDPFNFY GASLLSKGSF SKGRLLIDPN CSGHSPRTAR HAPAVRKFSP DLKLLKDVKI 120
121 SVSFTESCRS KDRKVLYTGA ERDVRAECGL LLSPVSGDVH ACPFGGSVGD GVGIGGESAD 180
181 KKDEENELDQ EKRVEYAVLD ELEDFTDNLE LDEEGAGGFT AKAIVQRDRV DEEALNF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [238-346] |
1 11 21 31 41 51
| | | | | |
1 PYEDDFDNDV DALLEEGLCA PKKRRTEEKY GGDSDHPSDG ETSVQPMMTK IKTVLKSRGR 60
61 PPTEPLPDGW IMTFHNSGVP VYLHRESRVV TWSRPYFLGT GSIRKHDPP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.327 | 0.200 | double-stranded RNA binding | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.281 | 0.063 | double-stranded RNA binding | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.356 | 0.044 | double-stranded RNA binding | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.345 | 0.030 | double-stranded RNA binding | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.367 | 0.009 | double-stranded RNA binding | a.24.17 | Group V grass pollen allergen |
|
Region A: Residues: [347-435] |
1 11 21 31 41 51
| | | | | |
1 LSSIPCLHYK KMKDNEEREQ SSDLTPSGDV SPVKPLSRSA ELEFPLDEPD SMGADPGPPD 60
61 EKDPLGAEAA PGALGQVKAK VEVCKDESV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.393 | 0.047 | double-stranded RNA binding | a.4.12 | TrpR-like |
| View | Download | 0.263 | 0.023 | double-stranded RNA binding | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.316 | 0.019 | double-stranded RNA binding | a.118.14 | FliG |
|
Region A: Residues: [436-773] |
1 11 21 31 41 51
| | | | | |
1 DLEEFRSYLE KRFDFEQVTV KKFRTWAERR QFNREMKRKQ AESERPILPA NQKLITLSVQ 60
61 DAPTKKEFVI NPNGKSEVCI LHEYMQRVLK VRPVYNFFEC ENPSEPFGAS VTIDGVTYGS 120
121 GTASSKKLAK NKAARATLEI LIPDFVKQTS EEKPKDSEEL EYFNHISIED SRVYELTSKA 180
181 GLLSPYQILH ECLKRNHGMG DTSIKFEVVP GKNQKSEYVM ACGKHTVRGW CKNKRVGKQL 240
241 ASQKILQLLH PHVKNWGSLL RMYGRESSKM VKQETSDKSV IELQQYAKKN KPNLHILSKL 300
301 QEEMKRLAEE REETRKKPKM SIVASAQPGG EPLCTVDV
|
| Detection Method: | |
| Confidence: | 50.154902 |
| Match: | 2yt4A |
| Description: | No description for 2yt4A was found. |
