| Protein: | GluRIIE-PB |
| Organism: | Drosophila melanogaster |
| Length: | 897 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GluRIIE-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
553.0 | [0..1] | [875..12] |
|
Region A: Residues: [1-496] |
1 11 21 31 41 51
| | | | | |
1 MFFNHFVILW SLFSIHISVN WAQYENFGGY DNYQSLESVP IGLLTDQNTE QMNIVFDHAI 60
61 DVANQEVGTS LTSLKEEVNY GDAYQSYGKL CRMLETGIAG VFGPSSRHTA VHLMSICDAM 120
121 DIPHIYSYMS ENAEGFNLHP HPADLAKALY SLITEFNWTR FIFLYESAEY LNILNELTTM 180
181 LGKSGTVITV LRYDMQLNGN YKQVLRRVRK SVDNRIVVVG SSETMPEFLN QAQQVGIINE 240
241 DYKYIIGNLD FHSFDLEEYK YSEANITGLR LFSPEKMAVK ELLMKLGYPT DQDEFRNGSC 300
301 PITVEMALTY DAVQLFAQTL KNLPFKPMPQ NCSQRTESVR DDGSSFKNYM RTLRLTDRLL 360
361 TGPIYFEGNV RKGYHLDVIE LQPSGIVKVG TWDEDRQYRP QRLAPTTAQF DSVDNSLANK 420
421 TFIILLSVPN KPYAQLVETY KQLEGNSQYE GYGVDLIKEL ADKLGFNFTF VNGGNDYGSY 480
481 NKSTNESTGM LREIMT
|
| Detection Method: |  |
| Confidence: | 43.69897 |
| Match: | 2e4uA |
| Description: | No description for 2e4uA was found. |
|
Region A: Residues: [497-585] |
1 11 21 31 41 51
| | | | | |
1 GRADLAITDL TITSEREQAL DFTIPFMNLG IAILYLKPQK ATPELFTFMD PFSEEVWWFL 60
61 GFSFLGVSLS FFILGRLSPS EWDNPYPCI
|
| Detection Method: | |
| Confidence: | 2.33 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [586-798] |
1 11 21 31 41 51
| | | | | |
1 EEPEELENQF TLGNSIWFTT GALLQQGSEI GPKALSTRTV ASFWWFFTLI VVSSYTANLA 60
61 AFLTIEKPQS LINSVDDLAD NKDGVVYGAK KTGSTRNFFM TSAEERYKKM NKFMSENPQY 120
121 LTEDNMEGVN RVKTNTHYAF LMESTSIEYN TKRECNLKKI GDALDEKGYG IAMRKDWPHR 180
181 GKFNNALLEL QEQGVLEKMK NKWWNEVGTG ICA
|
| Detection Method: | |
| Confidence: | 30.39794 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [799-897] |
1 11 21 31 41 51
| | | | | |
1 TKEDAPDATP LDMNNLEGVF FVLLVGSCCA LLYGIISWVL FVMKKAHHYR VPLRDALKEE 60
61 FQFVIDFNNY VRVLKNSASI YSRSRQSSMS VASVAQESQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
