| Protein: | Dscam-PZ |
| Organism: | Drosophila melanogaster |
| Length: | 2017 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PZ.
| Description | E-value | Query Range |
Subject Range |
|
|
1533.0 | [0..3] | [2017..3] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVN
|
| Detection Method: |  |
| Confidence: | 79.69897 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [139-244] |
1 11 21 31 41 51
| | | | | |
1 QYYEAEVVSE YVIRGNTAVL KCTIPSFVAD FLRVEAWVAS DGTEYAPEED FDGKYLVLPS 60
61 GELHIREVGP EDGYKSYQCR TKHRLTGETR LSATKGRLVI TEPVGT
|
| Detection Method: | |
| Confidence: | 20.045757 |
| Match: | 2ec8A |
| Description: | No description for 2ec8A was found. |
|
Region A: Residues: [245-914] |
1 11 21 31 41 51
| | | | | |
1 VSPKISTGED FKHLKGKSSQ DLSILCPAQA YPQPFFRWYK FIEGTTRKQA VVLNDRVKQV 60
61 SGTLIIKDAV VEDSGKYLCV VNNSVGGESV ETVLTVTAPL SAKIDPPTQT VDFGRPAVFT 120
121 CQYTGNPIKT VSWMKDGKAI GHSEPVLRIE SVKKEDKGMY QCFVRNDQES AEASAELKLG 180
181 GRFDPPVIRQ AFQEETMEPG PSVFLKCVAG GNPTPEISWE LDGKKIANND RYQVGQYVTV 240
241 NGDVVSYLNI TSVHANDGGL YKCIAKSKVG VAEHSAKLNV YGLPYIRQME KKAIVAGETL 300
301 IVTCPVAGYP IDSIVWERDN RALPINRKQK VFPNGTLIIE NVERNSDQAT YTCVAKNQEG 360
361 YSARGSLEVQ VMVPPQIQAF DFGSEAANTG EMAGGFCMVP KGDLPMEIRW TLNSAPIITG 420
421 EHGFSLSRLN PRTSSLSIDS LEARHRGLYR CIASNKAGSA EYSAELHVNV PPRWILEPTD 480
481 KAFAQGSDAK VECKADGFPK PQVTWKKAVG DTPGEYKDLK KSDNIRVEEG TLHVDNIQKT 540
541 NEGYYLCEAI NGIGSGLSAV IMISVQAPPE FTEKLRNQTA RRGEPAVLQC EAKGEKPIGI 600
601 LWNMNNMRLD PKNDNRYTIR EEILSTGVMS SLSIKRTERS DSALFTCVAT NAFGSDDASI 660
661 NMIVQEVPEM
|
| Detection Method: | |
| Confidence: | 56.39794 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [915-1310] |
1 11 21 31 41 51
| | | | | |
1 PYALKVLDKS GRSVQLSWAQ PYDGNSPLDR YIIEFKRSRA SWSEIDRVIV PGHTTEAQVQ 60
61 KLSPATTYNI RIVAENAIGT SQSSEAVTII TAEEAPSGKP QNIKVEPVNQ TTMRVTWKPP 120
121 PRTEWNGEIL GYYVGYKLSN TNSSYVFETI NFITEEGKEH NLELQNLRVY TQYSVVIQAF 180
181 NKIGAGPLSE EEKQFTAEGT PSQPPSDTAC TTLTSQTIRV GWVSPPLESA NGVIKTYKVV 240
241 YAPSDEWYDE TKRHYKKTAS SDTVLHGLKK YTNYTMQVLA TTAGGDGVRS VPIHCQTEPD 300
301 VPEAPTDVKA LVMGNAAILV SWRPPAQPNG IITQYTVYSK AEGAETETKT QKVPHYQMSF 360
361 EATELEKNKP YEFWVTASTT IGEGQQSKSI VAMPSD
|
| Detection Method: | |
| Confidence: | 30.522879 |
| Match: | 1fnfA |
| Description: | FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1311-1404] |
1 11 21 31 41 51
| | | | | |
1 QVPAKIASFD DTFTATFKED AKMPCLAVGA PQPEITWKIK GVEFSANDRM RVLPDGSLLI 60
61 KSVNRQDAGD YSCHAENSIA KDSITHKLIV LAPP
|
| Detection Method: | |
| Confidence: | 34.39794 |
| Match: | 2nziA |
| Description: | No description for 2nziA was found. |
|
Region A: Residues: [1405-1584] |
1 11 21 31 41 51
| | | | | |
1 QSPHVTLSAT TTDALTVKLK PHEGDTAPLH GYTLHYKPEF GEWETSEVSV DSQKHNIEGL 60
61 LCGSRYQVYA TGFNNIGAGE ASDILNTRTK GQKPKLPEKP RFIEVSSNSV SLHFKAWKDG 120
121 GCPMSHFVVE SKKRDQIEWN QISNNVKPDN NYVVLDLEPA TWYNLRITAH NSAGFTVAEY 180
181
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 2ibgA |
| Description: | No description for 2ibgA was found. |
|
Region A: Residues: [1585-1854] |
1 11 21 31 41 51
| | | | | |
1 DFATLTVTGG TIAPSRDLPE LSAEDTIRII LSNLNLVVPV VAALLVIIIA IIVICILRSK 60
61 GNHHKDDVVY NQTMGPGATL DKRRPDLRDE LGYIAPPNRK LPPVPGSNYN TCDRIKRGRG 120
121 GLRSNHSTWD PRRNPNLYEE LKAPPVPMHG NHYGHAHGNA ECHYRHPGME DEICPYATFH 180
181 LLGFREEMDP TKAMNFQTFP HQNGHAGPVP GHAGTMLPPG HPGHVHSRSG SQSMPRANRY 240
241 QRKNSQGGQS SIYTPAPEYD DPANCAEEDQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1855-2017] |
1 11 21 31 41 51
| | | | | |
1 YRRYTRVNSQ GGSLYSGPGP EYDDPANCAP EEDQYGSQYG GPYGQPYDHY GSRGSMGRRS 60
61 IGSARNPGNG SPEPPPPPPR NHDMSNSSFN DSKESNEISE AECDRDHGPR GNYGAVKRSP 120
121 QPKDQRTTEE MRKLIERNET GPKQLQLQQA NGAGFTAYDT MAV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
