| Protein: | Dscam-PAZ |
| Organism: | Drosophila melanogaster |
| Length: | 2035 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dscam-PAZ.
| Description | E-value | Query Range |
Subject Range |
|
|
1583.0 | [0..3] | [2035..3] |
|
Region A: Residues: [1-256] |
1 11 21 31 41 51
| | | | | |
1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE 60
61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
121 NQFGSIISRD VHVRAVVPQS YTVNVMDESI LRGNSAILKC HIPSFVADFI VVDSWVEDEE 180
181 RVIYPQEDIA ESDGKYLVLP SGELHIREVG PEDGYKSYQC RTKHRLTGET RLSATKGRLV 240
241 ITEPIGSVSP KISNSD
|
| Detection Method: |  |
| Confidence: | 82.0 |
| Match: | 2v5sA |
| Description: | No description for 2v5sA was found. |
|
Region A: Residues: [257-900] |
1 11 21 31 41 51
| | | | | |
1 DLKHVKVKRL LSLSLLCPAQ AYPQPISRWY KFIEGTTRKQ AVVLNDRVKQ VSGTLIIKDA 60
61 VVEDSGKYLC VVNNSVGGES VETVLTVTAP LSAKIDPPTQ TVDFGRPAVF TCQYTGNPIK 120
121 TVSWMKDGKA IGHSEPVLRI ESVKKEDKGM YQCFVRNDQE SAEASAELKL GGRFDPPVIR 180
181 QAFQEETMEP GPSVFLKCVA GGNPTPEISW ELDGKKIANN DRYQVGQYVT VNGDVVSYLN 240
241 ITSVHANDGG LYKCIAKSKV GVAEHSAKLN VYGLPYIRQM EKKAIVAGET LIVTCPVAGY 300
301 PIDSIVWERD NRALPINRKQ KVFPNGTLII ENVERNSDQA TYTCVAKNQE GYSARGSLEV 360
361 QVMVAPKIAP FDFGDEPSNF GESASVQCLV TSGDFPVSFA WLFNGREINE NVYDVSMVKL 420
421 GKKISALSID IVRDHHAGNY TCVAVNRATS VNFTAELVVN VPPRWILEPT DKAFAQGSDA 480
481 KVECKADGFP KPQVTWKKAV GDTPGEYKDL KKSDNIRVEE GTLHVDNIQK TNEGYYLCEA 540
541 INGIGSGLSA VIMISVQAPP EFTEKLRNQT ARRGEPAVLQ CEAKGEKPIG ILWNMNNMRL 600
601 DPKNDNRYTI REEILSTGVM SSLSIKRTER SDSALFTCVA TNAF
|
| Detection Method: | |
| Confidence: | 59.522879 |
| Match: | 1e07A |
| Description: | Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [901-1373] |
1 11 21 31 41 51
| | | | | |
1 GSDDASINMI VQEVPEMPYA LKVLDKSGRS VQLSWAQPYD GNSPLDRYII EFKRSRASWS 60
61 EIDRVIVPGH TTEAQVQKLS PATTYNIRIV AENAIGTSQS SEAVTIITAE EAPSGKPQNI 120
121 KVEPVNQTTM RVTWKPPPRT EWNGEILGYY VGYKLSNTNS SYVFETINFI TEEGKEHNLE 180
181 LQNLRVYTQY SVVIQAFNKI GAGPLSEEEK QFTAEGTPSQ PPSDTACTTL TSQTIRVGWV 240
241 SPPLESANGV IKTYKVVYAP SDEWYDETKR HYKKTASSDT VLHGLKKYTN YTMQVLATTA 300
301 GGDGVRSVPI HCQTEPDVPE APTDVKALVM GNAAILVSWR PPAQPNGIIT QYTVYSKAEG 360
361 AETETKTQKV PHYQMSFEAT ELEKNKPYEF WVTASTTIGE GQQSKSIVAM PSDQVPAKIA 420
421 SFDDTFTATF KEDAKMPCLA VGAPQPEITW KIKGVEFSAN DRMRVLPDGS LLI
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 2v5yA |
| Description: | No description for 2v5yA was found. |
|
Region A: Residues: [1374-1604] |
1 11 21 31 41 51
| | | | | |
1 KSVNRQDAGD YSCHAENSIA KDSITHKLIV LAPPQSPHVT LSATTTDALT VKLKPHEGDT 60
61 APLHGYTLHY KPEFGEWETS EVSVDSQKHN IEGLLCGSRY QVYATGFNNI GAGEASDILN 120
121 TRTKGQKPKL PEKPRFIEVS SNSVSLHFKA WKDGGCPMSH FVVESKKRDQ IEWNQISNNV 180
181 KPDNNYVVLD LEPATWYNLR ITAHNSAGFT VAEYDFATLT VTGGTIAPLD D
|
| Detection Method: | |
| Confidence: | 24.09691 |
| Match: | 1fnfA |
| Description: | FRAGMENT OF HUMAN FIBRONECTIN ENCOMPASSING TYPE-III REPEATS 7 THROUGH 10 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1605-1832] |
1 11 21 31 41 51
| | | | | |
1 GSGHGNVHTR IRLPAWMPEW LDLNFMVPLI ATVVVVAVGI CVVCVALSRR RADDMRGGQK 60
61 DVYYDVVYNQ TMGPGATLDK RRPDLRDELG YIAPPNRKLP PVPGSNYNTC DRIKRGRGGL 120
121 RSNHSTWDPR RNPNLYEELK APPVPMHGNH YGHAHGNAEC HYRHPGMEDE ICPYATFHLL 180
181 GFREEMDPTK AMNFQTFPHQ NGHAGPVPGH AGTMLPPGHP GHVHSRSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1833-2035] |
1 11 21 31 41 51
| | | | | |
1 SQSMPRANRY QRKNSQGGQS SIYTPAPEYD DPANCAEEDQ YRRYTRVNSQ GGSLYSGPGP 60
61 EYDDPANCAP EEDQYGSQYG GPYGQPYDHY GSRGSMGRRS IGSARNPGNG SPEPPPPPPR 120
121 NHDMSNSSFN DSKESNEISE AECDRDHGPR GNYGAVKRSP QPKDQRTTEE MRKLIERNET 180
181 GPKQLQLQQA NGAGFTAYDT MAV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
