| Protein: | AKAP8 |
| Organism: | Homo sapiens |
| Length: | 692 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AKAP8.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..692] | [1..692] |
|
|
0.0 | [1..692] | [75..761] |
|
|
0.0 | [1..692] | [1..687] |
|
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0.0 | [1..692] | [1..683] |
|
|
0.0 | [39..692] | [5..655] |
|
|
0.0 | [1..692] | [1..698] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MDQGYGGYGA WSAGPANTQG AYGTGVASWQ GYENYNYYGA QNTSVTTGAT YSYGPASWEA 60
61 AKANDGGLAA GAPAMHMASY GPEPCTDNSD SLIAKINQRL DMMSKEGGRG GS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.408 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.425 | b.34.9 | Tudor/PWWP/MBT |
| View | Download | 0.385 | a.158.1 | F-box domain |
| View | Download | 0.371 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.446 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [113-310] |
1 11 21 31 41 51
| | | | | |
1 GGGGEGIQDR ESSFRFQPFE SYDSRPCLPE HNPYRPSYSY DYEFDLGSDR NGSFGGQYSE 60
61 CRDPARERGS LDGFMRGRGQ GRFQDRSNPG TFMRSDPFVP PAASSEPLST PWNELNYVGG 120
121 RGLGGPSPSR PPPSLFSQSM APDYGVMGMQ GAGGYDSTMP YGCGRSQPRM RDRDRPKRRG 180
181 FDRFGPDGTG RKRKQFQL
|
| Detection Method: | |
| Confidence: | 9.39794 |
| Match: | PF04988.3 |
| Description: | No description for PF04988.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [311-692] |
1 11 21 31 41 51
| | | | | |
1 YEEPDTKLAR VDSEGDFSEN DDAAGDFRSG DEEFKGEDEL CDSGRQRGEK EDEDEDVKKR 60
61 REKQRRRDRT RDRAADRIQF ACSVCKFRSF DDEEIQKHLQ SKFHKETLRF ISTKLPDKTV 120
121 EFLQEYIVNR NKKIEKRRQE LMEKETAKPK PDPFKGIGQE HFFKKIEAAH CLACDMLIPA 180
181 QPQLLQRHLH SVDHNHNRRL AAEQFKKTSL HVAKSVLNNR HIVKMLEKYL KGEDPFTSET 240
241 VDPEMEGDDN LGGEDKKETP EEVAADVLAE VITAAVRAVD GEGAPAPESS GEPAEDEGPT 300
301 DTAEAGSDPQ AEQLLEEQVP CGTAHEKGVP KARSEAAEAG NGAETMAAEA ESAQTRVAPA 360
361 PAAADAEVEQ TDAESKDAVP TE
|
| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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