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View Structure Prediction Details

Protein: gi|222626209, gi...
Organism: Oryza sativa Japonica Group
Length: 302 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222626209, gi....

Description E-value Query
Range
Subject
Range
gi|215697434, gi... - gi|51964534|ref|XP_507052.1| PREDICTED OJ1202_E07.21-2 gene product [Oryza sativa (japonica cultivar...
208.0 [0..13] [302..12]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVYEQDPDV LRWSLHLLLP PAAALHYQQR TSSVDCDEMI AHALQEELSY AQSQSLSSSI  60
   61 LHLPPSAPPL 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [71-141]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KEDEQDDAPP PPPPFSSCST PADYTNTNNH NAHDCLIEFV DDFSALDGQV GKRLHDMIPI  60
   61 PHVPKTNGDI P

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [142-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVDEAFSDHQ RLLHRLELYD LAELKVEGDG NCQFRALSDQ FYRTTEHHRF VRQQIVKQLE  60
   61 SYPEIYAGYV PMDYREYLKK MIKNGEWGDH VTLQAAADSY GVKIFILTSF RDTCYIEILP 120
  121 VVQKSERVIC LSFWAEVHYN SIYPEGELPV MENKRKRWWH F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.30103
Match: 1tffA
Description: Structure of Otubain-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.529663942126259 bayes_pls_golite062009
hydrolase activity 0.16837900182603 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle