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Protein Overview: gi|222626209, gi...

General Information:
Name(s) found: gi|222626209 [NCBI NR]
gi|215701350 [NCBI NR]
gi|115456739 [NCBI NR]
gi|113550441 [NCBI NR]
gi|108712218 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|222626209|gb|EEE60341.1| hypothetical protein OsJ_13452 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215701350|dbj|BAG92774.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115456739|ref|NP_001051970.1| Os03g0859800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113550441|dbj|BAF13884.1| Os03g0859800 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108712218|gb|ABG00013.1| OTU-like cysteine protease family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVYEQDPDV LRWSLHLLLP PAAALHYQQR TSSVDCDEMI AHALQEELSY AQSQSLSSSI  60
   61 LHLPPSAPPL KEDEQDDAPP PPPPFSSCST PADYTNTNNH NAHDCLIEFV DDFSALDGQV 120
  121 GKRLHDMIPI PHVPKTNGDI PSVDEAFSDH QRLLHRLELY DLAELKVEGD GNCQFRALSD 180
  181 QFYRTTEHHR FVRQQIVKQL ESYPEIYAGY VPMDYREYLK KMIKNGEWGD HVTLQAAADS 240
  241 YGVKIFILTS FRDTCYIEIL PVVQKSERVI CLSFWAEVHY NSIYPEGELP VMENKRKRWW 300
  301 HF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] MSA 3.106996 View MSA. No confident structure predictions are available.
    2 View Details [71..141] MSA 3.180997 View MSA. No confident structure predictions are available.
    3 View Details [142..302] PSI-BLAST 12.30103 Structure of Otubain-2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.529663942126259 bayes_pls_golite062009
  • hydrolase activity
    		•  0.16837900182603 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle