| Protein: | gi|108711445 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 920 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108711445.
| Description | E-value | Query Range |
Subject Range |
|
|
818.0 | [0..1] | [920..1] |
|
|
686.0 | [0..2] | [919..22] |
|
|
681.0 | [0..2] | [919..22] |
|
|
677.0 | [0..2] | [919..39] |
|
|
676.0 | [0..2] | [919..22] |
|
|
663.0 | [0..2] | [918..22] |
|
|
653.0 | [0..1] | [919..22] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MVLTTPLAEA ACRKSGLSVV DMLSPFSLFK KIDVPVRTAS DQPYRLQMFK IRMVYASDVR 60
61 KQDYEVADQR IKPVVSEANE SALPDLLSDP PQLEDVLSKP EAELCPLWIK KFNRALMRTL 120
121 SFSEHETFDH PVACLLVVSS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [141-310] |
1 11 21 31 41 51
| | | | | |
1 KDNEPISKFV DLFNTNQLPS LLNEGIMDPQ ILKHYLILHD QQDGPQEIAM NILAEMKSTL 60
61 GLNDCKLLCI NSSTEADGAD AENSWLPYKS HGLHNQDGAC WLNTDDLNEI KDFMQDLASN 120
121 HIIPYMEQKI RVLNQQVATT RKGFRNQIKN LWWRKRDDVP EAANGPMYTF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [311-488] |
1 11 21 31 41 51
| | | | | |
1 TSIESQIRVL GDYAFMLRDY ELALSNYRLL STDYKLDKAW KRFAGVQEMS GLCYFMLDQS 60
61 RKDAEYCLDS AFSTYLRIGS SGKRNATRCG IWWAEMLKTR GQYREASSVY YRVSNEEPSL 120
121 HSAVLLEQAA CCYVLSKPPM LRKYGFHLVL AGNSYYISDQ KQHAVRAYRN ALFVYKQH
|
| Detection Method: | |
| Confidence: | 5.221849 |
| Match: | 2fo7A |
| Description: | Crystal structure of an 8 repeat consensus TPR superhelix (trigonal crystal form) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [489-666] |
1 11 21 31 41 51
| | | | | |
1 PWSYINDHVH FNVGRWYGVL GIFDVAIKHL LEVIACSHQS LTTQSMFLND FFHFVQSMGK 60
61 KFDVYKLQLP VINMPSLRVI YEDHRTYASD ADVNVSESIW QELEEEMIPS SSIVRTNWLE 120
121 KSPDLRKYKD SCVCVVGEAV KVRIELRNPL QIPVVVSCIS LICQLSTSLD ASSAVNSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [667-812] |
1 11 21 31 41 51
| | | | | |
1 LTTGAGEDIA NTKPAISTFE DDGNNFTVSK LDIVLGGSET KSVQLEVTPK VEGILKLHGI 60
61 RWTLSDLLVG YQYFEFDTKR KTKKGKKGPR RTLSNTLIVI KGLPKLTGCI DHLPTNAFAG 120
121 DLRLLKLNLR NQSEYAVKNI KMKLSH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [813-920] |
1 11 21 31 41 51
| | | | | |
1 PRFVIPGDLS EVDFEFPQCL RKHVQSEIST VSTKRTQGDA KGLLFTFSQD IKIQEGATFS 60
61 WPIWFHAATP GNFSLYISLY YEMESPSEIT YRTLRMHYNI EVMTCACI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
