| Protein: | gi|222624660, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 726 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222624660, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..47] | [679..1] |
|
Region A: Residues: [1-70] |
1 11 21 31 41 51
| | | | | |
1 MDEEAKPNPN ADAAPAAAEA AASSPPPLSS SESAEGKDKE EEKEEEEEEE AGDLVEKLVE 60
61 LVEEIAAISD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [71-210] |
1 11 21 31 41 51
| | | | | |
1 FRNAYRRQFC NLSRRIRLLA PMLEEAKEGP RPLPDVSYSA LRRLREALAD SRELLRLGVS 60
61 GSKISLVLER EKIMKSFQDI TARLEQALGL ISFDELDISD EVREQVELVH AQFKRAKERS 120
121 DPSDDDLFND LVSVYNSSTS
|
| Detection Method: | |
| Confidence: | 18.0 |
| Match: | 2c2lA |
| Description: | Crystal structure of the CHIP U-box E3 ubiquitin ligase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [211-271] |
1 11 21 31 41 51
| | | | | |
1 ANVDPDILQR LSDKLQLATI SDLNQESLIL HEMASGGDPG AVVEKMSMLL KRIKDFVQSR 60
61 D
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [272-371] |
1 11 21 31 41 51
| | | | | |
1 PEMGTPVNTT ELSGKDNMAS LIVPDDFRCP ISLDLMKDPV IVATGQTYER GCIERWLEAG 60
61 HDTCPKTQQK LPNKSLTPNY VLRSLIAQWC EANGMEPPKR
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1t1hA |
| Description: | NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0938889867773109 | bayes_pls_golite062009 |
|
Region A: Residues: [372-552] |
1 11 21 31 41 51
| | | | | |
1 AAQHHNAPAS CTAAEHSNVV ELLQKLLSQN LEDQREAAGM LRQLAKRSPE NRACIGDAGA 60
61 IPILVSLLSI TDVSTQEHVV TALLNLSIYE ENKARIITSG AVPGVVHVLK RGSMEARENS 120
121 AATLFSLSLV DENKITIGAS GAIPALVLLL SNGSQRGKRD AATALFNLCI YQGNKGKAVR 180
181 A
|
| Detection Method: | |
| Confidence: | 3.59 |
| Match: | 1xqrA |
| Description: | Crystal structure of the HspBP1 core domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.267627928716605 | bayes_pls_golite062009 |
|
Region A: Residues: [553-726] |
1 11 21 31 41 51
| | | | | |
1 GLIPVLLGLV TETESGMMDE ALAILAILSS HPEGKTAISS ANAIPMLVGV IRNGSARNKE 60
61 NAAAVLVHLC NGEQQQQHLA EAQEQGIVTL LEELAKSGTD RGKRKAIQLL ERMNRFLMQQ 120
121 SQAQAQAEAM AQAHAHAQSQ AQVQALNEAQ SQVEMQVEQL LLPTTSHLSD RRDG
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1w63B |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
