| Protein: | gi|108707446 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 692 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108707446.
| Description | E-value | Query Range |
Subject Range |
|
|
766.0 | [0..1] | [692..1] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MVFQKRSSLE MESGGGSHVA EMPRVPKSAR GKRSIRKKES QGQVMCAFDL LATVAGKLLD 60
61 EGEGSLGNAS SGTPAVDASP KDVRVKQEQC DEEAKHFKNE VMDQDSCNES ALVSHIAFQR 120
121 PVNHHGRKGE DPEGSHAVIE DPKAKSEALD KESSMISCTK AELGCNFAAI ADRWSPESVE 180
181 SGAFTGDAAA IAMPATTSGF HKNAPDMYNL LDPMDVDVKP PPLVSSDSTG EMPLYGNK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-363] |
1 11 21 31 41 51
| | | | | |
1 IRRSTSFPRV PKGGAGFTVD RDEDDDDKSS GCTHPSTATN RGFRPNCTAG HSRVKKLLAC 60
61 KHRKVAPARM HKGDLSYSDV DRKPSFRNKK MYYTRQRTQR STFKRRKMFD RHSAQVSEEY 120
121 AKANT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [364-476] |
1 11 21 31 41 51
| | | | | |
1 KFAARDSHAV SLEANKGTNS TAFQKSQESS DCHVKLRIKS FKVPELLIEI PETATVGSLK 60
61 KTVLEAVNAI LGGGLRVGVL HHGKKVRDDN KTLMQAGISH DEVLDNLGFS LEP
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 1j8cA |
| Description: | Ubiquitin-like N-terminal domain of PLIC-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0155013961187369 | bayes_pls_golite062009 |
|
Region A: Residues: [477-583] |
1 11 21 31 41 51
| | | | | |
1 NCAPHPSQLS PPEDNEFMET VDTTEPLARI APADSSSKHG EVDASQELAL APLSANYQGS 60
61 DHDFVHSPGG MSSPDKASTN SRAIVPVTPA DSNAGAIVPA NKAKRSP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [584-692] |
1 11 21 31 41 51
| | | | | |
1 EQGQRRIRRP FSVAEVEALV LAVEKLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT 60
61 ASISPQQRRG EPVPQELLDR VLAAQAYWSQ QQAKLQPKTP PLAEALLLT
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 2ajeA |
| Description: | No description for 2ajeA was found. |
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
