| Protein: | gi|108705796 |
| Organism: | Oryza sativa Japonica Group |
| Length: | 598 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108705796.
| Description | E-value | Query Range |
Subject Range |
|
|
540.0 | [0..1] | [592..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MVDWASDSDN DKFEWDTDGE AETSSAPALR NIDAPGPSTR LPQDANGKAN GSGALVAEFM 60
61 GMGFPKEMIL KAIKEIGDTD TEQLLELLLT YQAIGGDASV GNCSASACAP QTLEVDEEED 120
121 DTNWDEYDTA GNCDRTPHSD GSGDEDFF
|
| Detection Method: |  |
| Confidence: | 1.1 |
| Match: | 1vg5A |
| Description: | Solution Structure of RSGI RUH-014, a UBA domain from Arabidopsis cDNA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-471] |
1 11 21 31 41 51
| | | | | |
1 QEMSEKDEKM KSLVNMGFPE DEAKMAIDRC GLDAPVAVLV DSIYASQEAG NGYSANLSDY 60
61 EDTEFSSFGG RKKTRFVDGS KKRKRYGSGP SGNQVPFDGS HEEPMPLPNP MVGFSLPNER 120
121 LRSVHRNLPD QALGPPFFYY ENVALAPKGV WTTISRFLYD IQPEFVDSKY FCAAARKRGY 180
181 IHNLPIENRS PVLPMPPKTI SEAFPNTKRW WPSWDPRRQF NCLQTCMASA KLTERIRCAL 240
241 GRFSDVPTPQ VQKYVLDECR KWNLVWVGKN KVAPLEPDEM EFLLGYPRNH TRGVSRTERY 300
301 RALGNSFQVD TVAYHLSVLR DLF
|
| Detection Method: | |
| Confidence: | 47.154902 |
| Match: | 1svuA |
| Description: | Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
|
Region A: Residues: [472-598] |
1 11 21 31 41 51
| | | | | |
1 PNGMNVLSLF SGIGGAEVAL HRLGIHMKTV ISVEKSEVNR TILKSWWDQT QTGTLIEIAD 60
61 VRHLTTERIE TFIRRFGGFD LVIGGSPCNN LAGSNRHHRD GLEGEHSALF YDYIRILEHV 120
121 KATMSAV
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1wy7A |
| Description: | crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii |
Matching Structure (courtesy of the PDB): |
|
