| Protein: | gi|113547189, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 597 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113547189, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
529.0 | [0..1] | [591..1] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MVDWASDSDN DKFEWDTDGE AETSSAPALR NIDAPGPSTR LPQDANGKAN GSGALVAEFM 60
61 GMGFPKEMIL KAIKEIGDTD TEQLLELLLT YQAIGGDAS
|
| Detection Method: |  |
| Confidence: | 1.16 |
| Match: | 1wgnA |
| Description: | Solution Structure of UBA domain of Human Ubiquitin Associated Protein 1 (UBAP1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [100-180] |
1 11 21 31 41 51
| | | | | |
1 VGNCSASACA PQTLEVDEEE DDTNWDEYDT AGNCDRTPHS DGSGDEDFFQ EMSEKDEKMK 60
61 SLVNMGFPED EAKMAIDRCL D
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
|
Region A: Residues: [181-471] |
1 11 21 31 41 51
| | | | | |
1 APVAVLVDSI YASQEAGNGY SANLSDYEDT EFSSFGGRKK TRFVDGSKKR KRYGSGPSGN 60
61 QVPFDGSHEE PMPLPNPMVG FSLPNERLRS VHRNLPDQAL GPPFFYYENV ALAPKGVWTT 120
121 ISRFLYDIQP EFVDSKYFCA AARKRGYIHN LPIENRSPVL PMPPKTISEA FPNTKRWWPS 180
181 WDPRRQFNCL QTCMASAKLT ERIRCALGRF SDVPTPQVQK YVLDECRKWN LVWVGKNKVA 240
241 PLEPDEMEFL LGYPRNHTRG VSRTERYRAL GNSFQVDTVA YHLSVLRDLF P
|
| Detection Method: | |
| Confidence: | 44.522879 |
| Match: | 1svuA |
| Description: | Structure of the Q237W mutant of HhaI DNA methyltransferase: an insight into protein-protein interactions |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
|
Region A: Residues: [472-597] |
1 11 21 31 41 51
| | | | | |
1 NGMNVLSLFS GIGGAEVALH RLGIHMKTVI SVEKSEVNRT ILKSWWDQTQ TGTLIEIADV 60
61 RHLTTERIET FIRRFGGFDL VIGGSPCNNL AGSNRHHRDG LEGEHSALFY DYIRILEHVK 120
121 ATMSAV
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 1wy7A |
| Description: | crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii |
Matching Structure (courtesy of the PDB): |
|
