| Protein: | gi|40288288, gi|... |
| Organism: | Homo sapiens |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|40288288, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [26..608] | [27..608] |
|
|
0.0 | [26..608] | [27..651] |
|
|
0.0 | [25..608] | [25..585] |
|
|
0.0 | [30..608] | [4..588] |
|
|
0.0 | [30..608] | [5..602] |
|
|
0.0 | [151..608] | [4..461] |
|
|
0.0 | [30..608] | [4..538] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MAAAAAAVGP GAGGAGSAVP GGAGPCATVS VFPGARLLTI GDANGEIQRH AEQQALRLEV 60
61 RAGPDSAGIA LYSHEDVCVF KCSVSRETEC SRVGKQSFII TLGCNSVLIQ FATPNDFCSF 120
121 YNILKTCRGH TLERS
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1wxwA |
| Description: | Crystal structure of Tt1595, a putative SAM-dependent methyltransferase from Thermus thermophillus HB8 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.36322489802895 | bayes_pls_golite062009 |
| nucleic acid binding | 2.1776279023087 | bayes_pls_golite062009 |
| DNA binding | 2.00644232993633 | bayes_pls_golite062009 |
| binding | 1.75638932389306 | bayes_pls_golite062009 |
| transcription factor activity | 1.30276669414152 | bayes_pls_golite062009 |
| protein binding | 0.37678401200507 | bayes_pls_golite062009 |
| catalytic activity | 0.147263815852997 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.0250652037156978 | bayes_pls_golite062009 |
|
Region A: Residues: [136-530] |
1 11 21 31 41 51
| | | | | |
1 VFSERTEESS AVQYFQFYGY LSQQQNMMQD YVRTGTYQRA ILQNHTDFKD KIVLDVGCGS 60
61 GILSFFAAQA GARKIYAVEA STMAQHAEVL VKSNNLTDRI VVIPGKVEEV SLPEQVDIII 120
121 SEPMGYMLFN ERMLESYLHA KKYLKPSGNM FPTIGDVHLA PFTDEQLYME QFTKANFWYQ 180
181 PSFHGVDLSA LRGAAVDEYF RQPVVDTFDI RILMAKSVKY TVNFLEAKEG DLHRIEIPFK 240
241 FHMLHSGLVH GLAFWFDVAF IGSIMTVWLS TAPTEPLTHW YQVRCLFQSP LFAKAGDTLS 300
301 GTCLLIANKR QSYDISIVAQ VDQTGSKSSN LLDLKNPFFR YTGTTPSPPP GSHYTSPSEN 360
361 MWNTGSTYNL SSGMAVAGMP TAYDLSSVIA SGSSV
|
| Detection Method: | |
| Confidence: | 81.09691 |
| Match: | 2v74B |
| Description: | No description for 2v74B was found. |
|
Region A: Residues: [531-608] |
1 11 21 31 41 51
| | | | | |
1 GHNNLIPLAN TGIVNHTHSR MGSIMSTGIV QGSSGAQGSG GGSTSAHYAV NSQFTMGGPA 60
61 ISMASPMSIP TNTMHYGS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
