| Protein: | PRPF3 |
| Organism: | Homo sapiens |
| Length: | 683 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRPF3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..683] | [1..684] |
|
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0.0 | [1..683] | [1..683] |
|
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0.0 | [1..683] | [1..683] |
|
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0.0 | [1..683] | [1..683] |
|
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0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..685] |
|
|
0.0 | [1..683] | [1..683] |
|
|
0.0 | [1..683] | [1..683] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MALSKRELDE LKPWIEKTVK RVLGFSEPTV VTAALNCVGK GMDKKKAADH LKPFLDDSTL 60
61 RFVDKLFEAV EEGRSSRHSK SSSDRSR
|
| Detection Method: |  |
| Confidence: | 32.30103 |
| Match: | 1x4qA |
| Description: | Solution structure of PWI domain in U4/U6 small nuclear ribonucleoprotein Prp3(hPrp3) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [88-188] |
1 11 21 31 41 51
| | | | | |
1 KRELKEVFGD DSEISKESSG VKKRRIPRFE EVEEEPEVIP GPPSESPGML TKLQIKQMME 60
61 AATRQIEERK KQLSFISPPT PQPKTPSSSQ PERLPIGNTI Q
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.501 | c.47.1 | Thioredoxin-like |
| View | Download | 0.283 | a.24.3 | Cytochromes |
| View | Download | 0.321 | a.7.7 | BAG domain |
| View | Download | 0.329 | d.58.29 | Adenylyl and guanylyl cyclase catalytic domain |
| View | Download | 0.267 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
|
Region A: Residues: [189-371] |
1 11 21 31 41 51
| | | | | |
1 PSQAATFMND AIEKARKAAE LQARIQAQLA LKPGLIGNAN MVGLANLHAM GIAPPKVELK 60
61 DQTKPTPLIL DEQGRTVDAT GKEIELTHRM PTLKANIRAV KREQFKQQLK EKPSEDMESN 120
121 TFFDPRVSIA PSQRQRRTFK FHDKGKFEKI AQRLRTKAQL EKLQAEISQA ARKTGIHTST 180
181 RLA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [372-427] |
1 11 21 31 41 51
| | | | | |
1 LIAPKKELKE GDIPEIEWWD SYIIPNGFDL TEENPKREDY FGITNLVEHP AQLNPP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [428-496] |
1 11 21 31 41 51
| | | | | |
1 VDNDTPVTLG VYLTKKEQKK LRRQTRREAQ KELQEKVRLG LMPPPEPKVR ISNLMRVLGT 60
61 EAVQDPTKV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.334 | 0.050 | nuclear mRNA splicing, via spliceosome | d.58.17 | Metal-binding domain |
| View | Download | 0.439 | 0.009 | nuclear mRNA splicing, via spliceosome | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.320 | 0.003 | nuclear mRNA splicing, via spliceosome | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.439 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.322 | N/A | N/A | d.58.17 | Metal-binding domain |
|
Region A: Residues: [497-683] |
1 11 21 31 41 51
| | | | | |
1 EAHVRAQMAK RQKAHEEANA ARKLTAEQRK VKKIKKLKED ISQGVHISVY RVRNLSNPAK 60
61 KFKIEANAGQ LYLTGVVVLH KDVNVVVVEG GPKAQKKFKR LMLHRIKWDE QTSNTKGDDD 120
121 EESDEEAVKK TNKCVLVWEG TAKDRSFGEM KFKQCPTENM AREHFKKHGA EHYWDLALSE 180
181 SVLESTD
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 2iygA |
| Description: | No description for 2iygA was found. |
