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View Structure Prediction Details

Protein: gi|119631635, gi...
Organism: Homo sapiens
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119631635, gi....

Description E-value Query
Range
Subject
Range
gi|60652733, gi|... - gi|60652733|gb|AAX29061.1| glutamate decarboxylase 1 [synthetic construct], gi|30584475|gb|AAP36490....
359.0 [0..14] [224..14]
gi|204232, gi|21... - pir||I59173 glutamate decarboxylase - rat, gi|204232|gb|AAA41185.1| glutamate decarboxylase
355.0 [0..14] [224..13]
gi|1082397 - gi|1082397|pir||S51776 glutamate decarboxylase (EC 4.1.1.15) - human
350.0 [0..3] [213..2]
gi|46048860, gi|... - gi|46048860|ref|NP_990244.1| glutamate decarboxylase 1 (brain, 67kDa) [Gallus gallus], gi|4103978|gb...
341.0 [0..6] [213..2]
DCE1_PANTR - Glutamate decarboxylase 1 OS=Pan troglodytes GN=GAD1 PE=2 SV=1
337.0 [0..14] [213..14]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSTPSSSA TSSNAGADPN TTNLRPTTYD TWCGVAHGCT RKLGLKICGF LQRTNSLEEK  60
   61 SRLVSAFKER QSSKNLLSCE NSDR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DARFRRTETD FSNLFARDLL PAKNGEEQTV QFLLEVVDIL LNYVRKTFDR STKVLDFHHP  60
   61 HQLLEGMEGF NLELSDHPES LEQILVDCRD TLKYGVRTGH PRFFNQLSTG LDIIGLAGEW 120
  121 LTSTANTNMP SDMRECWLLR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.045757
Match: 2okjA
Description: No description for 2okjA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle